Calcium in PDB 6rfk: Crystal Structure of Egrck-Inhibited Gla-Domainless Fixa (K148Q, R150Q Variant)

Enzymatic activity of Crystal Structure of Egrck-Inhibited Gla-Domainless Fixa (K148Q, R150Q Variant)

All present enzymatic activity of Crystal Structure of Egrck-Inhibited Gla-Domainless Fixa (K148Q, R150Q Variant):
3.4.21.22;

Protein crystallography data

The structure of Crystal Structure of Egrck-Inhibited Gla-Domainless Fixa (K148Q, R150Q Variant), PDB code: 6rfk was solved by J.A.Huntington, T.J.Sendall, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 70.82 / 1.60
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 100.160, 100.160, 91.500, 90.00, 90.00, 90.00
R / Rfree (%) 12.6 / 16.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Egrck-Inhibited Gla-Domainless Fixa (K148Q, R150Q Variant) (pdb code 6rfk). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Egrck-Inhibited Gla-Domainless Fixa (K148Q, R150Q Variant), PDB code: 6rfk:

Calcium binding site 1 out of 1 in 6rfk

Go back to Calcium Binding Sites List in 6rfk
Calcium binding site 1 out of 1 in the Crystal Structure of Egrck-Inhibited Gla-Domainless Fixa (K148Q, R150Q Variant)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Egrck-Inhibited Gla-Domainless Fixa (K148Q, R150Q Variant) within 5.0Å range:
probe atom residue distance (Å) B Occ
S:Ca301

b:29.4
occ:1.00
O S:GLU75 2.2 34.8 1.0
O S:ASN72 2.3 31.3 1.0
OE2 S:GLU80 2.3 27.9 1.0
OE1 S:GLU70 2.3 28.8 1.0
OE1 S:GLU77 2.3 33.3 1.0
O1 S:GOL308 2.3 31.5 1.0
OE2 S:GLU77 2.6 54.1 1.0
CD S:GLU77 2.9 38.9 1.0
CD S:GLU70 3.3 31.9 1.0
C S:ASN72 3.4 36.5 1.0
CD S:GLU80 3.4 25.0 1.0
C S:GLU75 3.4 30.7 1.0
C1 S:GOL308 3.6 45.0 1.0
OE2 S:GLU70 3.7 29.7 1.0
CG S:GLU80 3.8 27.0 1.0
N S:ASN72 4.0 30.1 1.0
N S:GLU77 4.1 35.4 1.0
C3 S:GOL308 4.2 44.2 1.0
N S:GLU75 4.2 36.7 1.0
CA S:ASN72 4.2 28.2 1.0
CA S:THR76 4.3 33.8 1.0
CG S:GLU77 4.3 36.8 1.0
N S:THR76 4.3 35.0 1.0
CA S:GLU75 4.3 37.5 1.0
N S:ILE73 4.4 32.9 1.0
N S:HIS71 4.5 27.7 1.0
CA S:ILE73 4.5 30.7 1.0
C2 S:GOL308 4.5 43.4 1.0
C S:THR76 4.6 35.6 1.0
OE1 S:GLU80 4.6 26.8 1.0
CB S:GLU77 4.6 31.4 1.0
CB S:ASN72 4.6 31.6 1.0
CG S:GLU70 4.7 30.7 1.0
C S:ILE73 4.7 37.8 1.0
CB S:GLU75 4.9 40.1 1.0
CA S:GLU77 5.0 33.9 1.0
N S:GLU74 5.0 35.0 0.5

Reference:

T.J.Sendall, J.A.Huntington. uc(Nmr) Resonance Assignments of Apo and Egrck-Inhibited Factor Ixa To Be Published.
Page generated: Sat Dec 12 07:30:24 2020

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