Calcium in PDB 6ssa: Human Leukocyte Antigen Class I A02 Carrying Llwngpmqv

The structure of Human Leukocyte Antigen Class I A02 Carrying Llwngpmqv, PDB code: 6ssa was solved by P.J.Rizkallah, A.Bovay, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	70.07 / 2.11
Space group	P 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	117.908, 49.071, 169.011, 90.00, 92.48, 90.00
R / Rfree (%)	22.3 / 27.1

The binding sites of Calcium atom in the Human Leukocyte Antigen Class I A02 Carrying Llwngpmqv (pdb code 6ssa). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Human Leukocyte Antigen Class I A02 Carrying Llwngpmqv, PDB code: 6ssa:

Calcium binding site 1 out of 1 in the Human Leukocyte Antigen Class I A02 Carrying Llwngpmqv


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human Leukocyte Antigen Class I A02 Carrying Llwngpmqv within 5.0Å range: probe atom residue distance (Å) B Occ K:Ca301 b:54.0 occ:1.00 O K:HOH475 2.3 24.7 1.0 O K:LEU87 2.3 28.4 1.0 O K:HIS84 2.7 18.6 1.0 ND2 K:ASN83 2.7 19.2 1.0 O K:HOH486 2.7 25.7 1.0 O K:HOH479 2.8 38.1 1.0 C K:HIS84 3.5 17.8 1.0 C K:LEU87 3.6 28.8 1.0 CG K:ASN83 3.7 19.8 1.0 N K:HIS84 4.1 16.6 1.0 OD1 K:ASN83 4.1 22.0 1.0 CA K:VAL85 4.2 20.1 1.0 N K:VAL85 4.2 18.3 1.0 N K:LEU87 4.3 23.6 1.0 CA K:LEU87 4.3 25.6 1.0 CB K:LEU87 4.4 24.8 1.0 C K:VAL85 4.4 21.1 1.0 CA K:HIS84 4.5 16.4 1.0 O K:VAL85 4.5 22.4 1.0 N K:SER88 4.6 32.0 1.0 C K:SER88 4.8 34.4 1.0 CA K:SER88 4.8 34.1 1.0 CB K:ASN83 4.9 18.3 1.0 N K:GLN89 5.0 33.9 1.0 O K:SER88 5.0 36.2 1.0

A.Bovay, V.Zoete, P.J.Rizkallah, K.Beck, P.Delbreil, D.E.Speiser, D.K.Cole, S.A.Fuertes Marraco. Identification of A Superagonist Variant of the Immunodominant Yellow Fever Virus Epitope NS4B214-222BY Combinatorial Peptide Library Screening. Mol.Immunol. V. 125 43 2020.
ISSN: ISSN 0161-5890
PubMed: 32645549
DOI: 10.1016/J.MOLIMM.2020.06.025