Calcium in PDB 6t8e: Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Enzymatic activity of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
All present enzymatic activity of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose:
5.3.1.5;
Protein crystallography data
The structure of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose, PDB code: 6t8e
was solved by
H.J.Rozeboom,
D.B.Janssen,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
46.60 /
1.86
|
Space group
|
P 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
78.454,
79.267,
91.878,
115.46,
89.99,
117.07
|
R / Rfree (%)
|
13.9 /
17.6
|
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
(pdb code 6t8e). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 8 binding sites of Calcium where determined in the
Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose, PDB code: 6t8e:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Calcium binding site 1 out
of 8 in 6t8e
Go back to
Calcium Binding Sites List in 6t8e
Calcium binding site 1 out
of 8 in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca501
b:13.8
occ:1.00
|
OD2
|
A:ASP297
|
2.1
|
13.9
|
1.0
|
OD2
|
A:ASP340
|
2.2
|
18.6
|
1.0
|
OE2
|
A:GLU233
|
2.2
|
16.8
|
1.0
|
OE1
|
A:GLU269
|
2.2
|
13.3
|
1.0
|
O2
|
A:XLS503
|
2.3
|
25.9
|
1.0
|
O4
|
A:XLS503
|
2.3
|
24.8
|
1.0
|
CD
|
A:GLU233
|
3.0
|
15.7
|
1.0
|
OE1
|
A:GLU233
|
3.1
|
16.9
|
1.0
|
CG
|
A:ASP340
|
3.3
|
15.6
|
1.0
|
CG
|
A:ASP297
|
3.3
|
13.7
|
1.0
|
C4
|
A:XLS503
|
3.3
|
27.3
|
1.0
|
C2
|
A:XLS503
|
3.3
|
28.4
|
1.0
|
CD
|
A:GLU269
|
3.5
|
12.7
|
1.0
|
C3
|
A:XLS503
|
3.6
|
29.1
|
1.0
|
O3
|
A:XLS503
|
3.7
|
34.7
|
1.0
|
CB
|
A:ASP340
|
3.8
|
14.4
|
1.0
|
CB
|
A:ASP297
|
3.9
|
12.8
|
1.0
|
O
|
A:HOH635
|
3.9
|
18.8
|
1.0
|
CE1
|
A:HIS272
|
4.0
|
13.2
|
1.0
|
CB
|
A:GLU269
|
4.1
|
11.9
|
1.0
|
CG
|
A:GLU269
|
4.2
|
12.4
|
1.0
|
OD1
|
A:ASP297
|
4.3
|
14.6
|
1.0
|
OD1
|
A:ASP340
|
4.4
|
16.5
|
1.0
|
CG
|
A:GLU233
|
4.4
|
15.1
|
1.0
|
OE2
|
A:GLU269
|
4.4
|
13.3
|
1.0
|
NE2
|
A:HIS272
|
4.5
|
14.1
|
1.0
|
ND2
|
A:ASN267
|
4.6
|
13.0
|
1.0
|
C5
|
A:XLS503
|
4.7
|
27.2
|
1.0
|
C1
|
A:XLS503
|
4.7
|
29.5
|
1.0
|
ND1
|
A:HIS272
|
4.7
|
12.8
|
1.0
|
CA
|
A:CA502
|
4.9
|
18.0
|
1.0
|
|
Calcium binding site 2 out
of 8 in 6t8e
Go back to
Calcium Binding Sites List in 6t8e
Calcium binding site 2 out
of 8 in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca502
b:18.0
occ:1.00
|
OD1
|
A:ASP310
|
1.9
|
18.7
|
1.0
|
OD2
|
A:ASP308
|
2.0
|
23.8
|
1.0
|
OE2
|
A:GLU269
|
2.0
|
13.3
|
1.0
|
O
|
A:HOH635
|
2.1
|
18.8
|
1.0
|
OD1
|
A:ASP308
|
2.6
|
25.2
|
1.0
|
CG
|
A:ASP308
|
2.6
|
22.1
|
1.0
|
CD
|
A:GLU269
|
2.9
|
12.7
|
1.0
|
CG
|
A:ASP310
|
2.9
|
17.5
|
1.0
|
OE1
|
A:GLU269
|
3.1
|
13.3
|
1.0
|
NE2
|
A:HIS272
|
3.2
|
14.1
|
1.0
|
OD2
|
A:ASP310
|
3.2
|
20.5
|
1.0
|
O
|
A:HOH610
|
3.5
|
26.1
|
1.0
|
CD2
|
A:HIS272
|
3.7
|
12.7
|
1.0
|
ND2
|
A:ASN299
|
3.8
|
11.8
|
1.0
|
O2
|
A:XLS503
|
3.9
|
25.9
|
1.0
|
O
|
A:HOH837
|
3.9
|
32.2
|
1.0
|
CB
|
A:ASP308
|
4.0
|
19.5
|
1.0
|
CE1
|
A:HIS272
|
4.2
|
13.2
|
1.0
|
CG
|
A:GLU269
|
4.3
|
12.4
|
1.0
|
CB
|
A:ASP310
|
4.3
|
16.4
|
1.0
|
CB
|
A:ASN271
|
4.5
|
11.5
|
1.0
|
OD2
|
A:ASP340
|
4.6
|
18.6
|
1.0
|
O1
|
A:XLS503
|
4.7
|
31.0
|
1.0
|
CG
|
A:ASP340
|
4.7
|
15.6
|
1.0
|
O
|
A:ASP340
|
4.8
|
12.4
|
1.0
|
CA
|
A:ASP310
|
4.8
|
15.0
|
1.0
|
OD1
|
A:ASP340
|
4.8
|
16.5
|
1.0
|
OD1
|
A:ASN271
|
4.8
|
11.9
|
1.0
|
O
|
A:HOH608
|
4.8
|
37.0
|
1.0
|
C1
|
A:XLS503
|
4.9
|
29.5
|
1.0
|
CG
|
A:HIS272
|
4.9
|
12.5
|
1.0
|
CA
|
A:CA501
|
4.9
|
13.8
|
1.0
|
N
|
A:ASP310
|
4.9
|
14.3
|
1.0
|
C2
|
A:XLS503
|
4.9
|
28.4
|
1.0
|
CA
|
A:ASP308
|
5.0
|
17.4
|
1.0
|
CG
|
A:ASN271
|
5.0
|
11.6
|
1.0
|
|
Calcium binding site 3 out
of 8 in 6t8e
Go back to
Calcium Binding Sites List in 6t8e
Calcium binding site 3 out
of 8 in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca501
b:14.1
occ:1.00
|
OD2
|
B:ASP297
|
2.1
|
14.9
|
1.0
|
OD2
|
B:ASP340
|
2.2
|
15.2
|
1.0
|
OE2
|
B:GLU233
|
2.2
|
16.2
|
1.0
|
OE1
|
B:GLU269
|
2.3
|
14.8
|
1.0
|
O2
|
B:XLS503
|
2.3
|
29.6
|
1.0
|
O4
|
B:XLS503
|
2.3
|
25.7
|
1.0
|
CD
|
B:GLU233
|
3.0
|
14.9
|
1.0
|
OE1
|
B:GLU233
|
3.1
|
15.8
|
1.0
|
CG
|
B:ASP340
|
3.3
|
14.0
|
1.0
|
CG
|
B:ASP297
|
3.3
|
13.7
|
1.0
|
C4
|
B:XLS503
|
3.3
|
29.3
|
1.0
|
C2
|
B:XLS503
|
3.4
|
31.8
|
1.0
|
CD
|
B:GLU269
|
3.5
|
13.3
|
1.0
|
C3
|
B:XLS503
|
3.7
|
32.2
|
1.0
|
CB
|
B:ASP340
|
3.8
|
13.3
|
1.0
|
CB
|
B:ASP297
|
3.8
|
12.8
|
1.0
|
O3
|
B:XLS503
|
3.8
|
37.6
|
1.0
|
O
|
B:HOH635
|
3.8
|
22.4
|
1.0
|
CE1
|
B:HIS272
|
4.0
|
14.7
|
1.0
|
CB
|
B:GLU269
|
4.2
|
11.9
|
1.0
|
CG
|
B:GLU269
|
4.2
|
12.6
|
1.0
|
OD1
|
B:ASP340
|
4.3
|
15.1
|
1.0
|
OD1
|
B:ASP297
|
4.3
|
13.8
|
1.0
|
CG
|
B:GLU233
|
4.4
|
13.8
|
1.0
|
OE2
|
B:GLU269
|
4.4
|
14.2
|
1.0
|
NE2
|
B:HIS272
|
4.6
|
15.1
|
1.0
|
ND2
|
B:ASN267
|
4.6
|
11.3
|
1.0
|
C5
|
B:XLS503
|
4.7
|
28.5
|
1.0
|
C1
|
B:XLS503
|
4.7
|
32.7
|
1.0
|
ND1
|
B:HIS272
|
4.7
|
14.0
|
1.0
|
CA
|
B:CA502
|
4.9
|
16.6
|
1.0
|
|
Calcium binding site 4 out
of 8 in 6t8e
Go back to
Calcium Binding Sites List in 6t8e
Calcium binding site 4 out
of 8 in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca502
b:16.6
occ:1.00
|
OD2
|
B:ASP308
|
1.9
|
25.5
|
1.0
|
O
|
B:HOH635
|
1.9
|
22.4
|
1.0
|
OE2
|
B:GLU269
|
1.9
|
14.2
|
1.0
|
OD1
|
B:ASP310
|
2.0
|
18.0
|
1.0
|
OD1
|
B:ASP308
|
2.4
|
27.7
|
1.0
|
CG
|
B:ASP308
|
2.5
|
23.1
|
1.0
|
CD
|
B:GLU269
|
2.8
|
13.3
|
1.0
|
CG
|
B:ASP310
|
2.9
|
17.0
|
1.0
|
NE2
|
B:HIS272
|
3.1
|
15.1
|
1.0
|
OE1
|
B:GLU269
|
3.1
|
14.8
|
1.0
|
OD2
|
B:ASP310
|
3.2
|
18.2
|
1.0
|
O
|
B:HOH648
|
3.6
|
22.6
|
1.0
|
CD2
|
B:HIS272
|
3.7
|
13.8
|
1.0
|
ND2
|
B:ASN299
|
3.7
|
10.4
|
1.0
|
CB
|
B:ASP308
|
4.0
|
20.2
|
1.0
|
O2
|
B:XLS503
|
4.0
|
29.6
|
1.0
|
CE1
|
B:HIS272
|
4.1
|
14.7
|
1.0
|
CG
|
B:GLU269
|
4.2
|
12.6
|
1.0
|
CB
|
B:ASP310
|
4.3
|
15.7
|
1.0
|
OD2
|
B:ASP340
|
4.5
|
15.2
|
1.0
|
CB
|
B:ASN271
|
4.5
|
11.6
|
1.0
|
CG
|
B:ASP340
|
4.6
|
14.0
|
1.0
|
OD1
|
B:ASP340
|
4.7
|
15.1
|
1.0
|
O
|
B:HOH646
|
4.7
|
31.9
|
1.0
|
CA
|
B:ASP310
|
4.8
|
14.5
|
1.0
|
O
|
B:ASP340
|
4.8
|
12.3
|
1.0
|
CG
|
B:HIS272
|
4.8
|
13.2
|
1.0
|
CA
|
B:CA501
|
4.9
|
14.1
|
1.0
|
O1
|
B:XLS503
|
4.9
|
32.5
|
1.0
|
ND2
|
B:ASN271
|
4.9
|
11.0
|
1.0
|
C1
|
B:XLS503
|
5.0
|
32.7
|
1.0
|
CA
|
B:ASP308
|
5.0
|
17.4
|
1.0
|
N
|
B:ASP310
|
5.0
|
13.5
|
1.0
|
|
Calcium binding site 5 out
of 8 in 6t8e
Go back to
Calcium Binding Sites List in 6t8e
Calcium binding site 5 out
of 8 in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca501
b:11.2
occ:1.00
|
OD2
|
C:ASP297
|
2.1
|
13.7
|
1.0
|
O2
|
C:XLS503
|
2.1
|
26.0
|
1.0
|
OE1
|
C:GLU269
|
2.1
|
13.2
|
1.0
|
OE2
|
C:GLU233
|
2.2
|
16.8
|
1.0
|
OD2
|
C:ASP340
|
2.3
|
14.0
|
1.0
|
O4
|
C:XLS503
|
2.3
|
20.4
|
1.0
|
CD
|
C:GLU233
|
2.9
|
15.3
|
1.0
|
OE1
|
C:GLU233
|
3.1
|
17.1
|
1.0
|
C2
|
C:XLS503
|
3.2
|
26.7
|
1.0
|
CG
|
C:ASP297
|
3.3
|
13.6
|
1.0
|
C4
|
C:XLS503
|
3.3
|
23.7
|
1.0
|
CG
|
C:ASP340
|
3.3
|
13.3
|
1.0
|
CD
|
C:GLU269
|
3.4
|
12.8
|
1.0
|
C3
|
C:XLS503
|
3.6
|
26.6
|
1.0
|
O3
|
C:XLS503
|
3.7
|
30.6
|
1.0
|
O
|
C:HOH610
|
3.8
|
19.6
|
1.0
|
CB
|
C:ASP340
|
3.8
|
12.8
|
1.0
|
CB
|
C:ASP297
|
3.8
|
12.9
|
1.0
|
CE1
|
C:HIS272
|
4.1
|
11.3
|
1.0
|
CB
|
C:GLU269
|
4.1
|
11.7
|
1.0
|
CG
|
C:GLU269
|
4.1
|
12.1
|
1.0
|
OD1
|
C:ASP297
|
4.3
|
14.2
|
1.0
|
OE2
|
C:GLU269
|
4.3
|
13.5
|
1.0
|
CG
|
C:GLU233
|
4.3
|
14.1
|
1.0
|
OD1
|
C:ASP340
|
4.5
|
14.1
|
1.0
|
C1
|
C:XLS503
|
4.5
|
26.8
|
1.0
|
NE2
|
C:HIS272
|
4.6
|
11.8
|
1.0
|
C5
|
C:XLS503
|
4.7
|
23.6
|
1.0
|
ND2
|
C:ASN267
|
4.7
|
11.8
|
1.0
|
ND1
|
C:HIS272
|
4.7
|
11.1
|
1.0
|
CA
|
C:CA502
|
4.9
|
15.8
|
1.0
|
|
Calcium binding site 6 out
of 8 in 6t8e
Go back to
Calcium Binding Sites List in 6t8e
Calcium binding site 6 out
of 8 in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca502
b:15.8
occ:1.00
|
OD1
|
C:ASP310
|
2.0
|
16.6
|
1.0
|
OE2
|
C:GLU269
|
2.0
|
13.5
|
1.0
|
O
|
C:HOH610
|
2.0
|
19.6
|
1.0
|
OD2
|
C:ASP308
|
2.1
|
22.1
|
1.0
|
OD1
|
C:ASP308
|
2.4
|
20.7
|
1.0
|
CG
|
C:ASP308
|
2.5
|
18.9
|
1.0
|
CG
|
C:ASP310
|
2.9
|
15.5
|
1.0
|
CD
|
C:GLU269
|
3.0
|
12.8
|
1.0
|
NE2
|
C:HIS272
|
3.1
|
11.8
|
1.0
|
OD2
|
C:ASP310
|
3.2
|
17.5
|
1.0
|
OE1
|
C:GLU269
|
3.3
|
13.2
|
1.0
|
O
|
C:HOH628
|
3.6
|
22.2
|
1.0
|
CD2
|
C:HIS272
|
3.6
|
11.2
|
1.0
|
ND2
|
C:ASN299
|
3.8
|
11.7
|
1.0
|
O2
|
C:XLS503
|
3.9
|
26.0
|
1.0
|
CB
|
C:ASP308
|
4.0
|
17.4
|
1.0
|
CE1
|
C:HIS272
|
4.2
|
11.3
|
1.0
|
CG
|
C:GLU269
|
4.3
|
12.1
|
1.0
|
CB
|
C:ASP310
|
4.3
|
14.5
|
1.0
|
CB
|
C:ASN271
|
4.5
|
10.4
|
1.0
|
C1
|
C:XLS503
|
4.5
|
26.8
|
1.0
|
OD2
|
C:ASP340
|
4.6
|
14.0
|
1.0
|
CA
|
C:ASP310
|
4.7
|
13.3
|
1.0
|
CG
|
C:ASP340
|
4.7
|
13.3
|
1.0
|
O
|
C:HOH620
|
4.8
|
31.8
|
1.0
|
O
|
C:ASP340
|
4.8
|
12.6
|
1.0
|
CG
|
C:HIS272
|
4.8
|
11.2
|
1.0
|
C2
|
C:XLS503
|
4.8
|
26.7
|
1.0
|
OD1
|
C:ASN271
|
4.9
|
10.2
|
1.0
|
OD1
|
C:ASP340
|
4.9
|
14.1
|
1.0
|
N
|
C:ASP310
|
4.9
|
12.6
|
1.0
|
CA
|
C:CA501
|
4.9
|
11.2
|
1.0
|
CA
|
C:ASP308
|
5.0
|
15.4
|
1.0
|
CG
|
C:ASN271
|
5.0
|
10.4
|
1.0
|
O1
|
C:XLS503
|
5.0
|
28.6
|
1.0
|
|
Calcium binding site 7 out
of 8 in 6t8e
Go back to
Calcium Binding Sites List in 6t8e
Calcium binding site 7 out
of 8 in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca501
b:11.9
occ:1.00
|
OE1
|
D:GLU269
|
2.1
|
12.5
|
1.0
|
OD2
|
D:ASP297
|
2.1
|
12.5
|
1.0
|
OE2
|
D:GLU233
|
2.2
|
14.7
|
1.0
|
OD2
|
D:ASP340
|
2.2
|
14.9
|
1.0
|
O4
|
D:XLS503
|
2.3
|
19.2
|
1.0
|
O2
|
D:XLS503
|
2.3
|
21.1
|
1.0
|
CD
|
D:GLU233
|
3.0
|
13.8
|
1.0
|
OE1
|
D:GLU233
|
3.2
|
14.8
|
1.0
|
C4
|
D:XLS503
|
3.3
|
22.4
|
1.0
|
CG
|
D:ASP340
|
3.3
|
13.1
|
1.0
|
CG
|
D:ASP297
|
3.3
|
12.2
|
1.0
|
CD
|
D:GLU269
|
3.4
|
12.1
|
1.0
|
C2
|
D:XLS503
|
3.5
|
24.9
|
1.0
|
C3
|
D:XLS503
|
3.6
|
24.4
|
1.0
|
O3
|
D:XLS503
|
3.6
|
29.1
|
1.0
|
CB
|
D:ASP340
|
3.8
|
12.5
|
1.0
|
CB
|
D:ASP297
|
3.9
|
11.6
|
1.0
|
O
|
D:HOH775
|
4.0
|
19.8
|
1.0
|
CE1
|
D:HIS272
|
4.0
|
11.8
|
1.0
|
CB
|
D:GLU269
|
4.2
|
10.7
|
1.0
|
CG
|
D:GLU269
|
4.2
|
11.3
|
1.0
|
OE2
|
D:GLU269
|
4.3
|
12.6
|
1.0
|
OD1
|
D:ASP297
|
4.4
|
12.3
|
1.0
|
CG
|
D:GLU233
|
4.4
|
13.1
|
1.0
|
OD1
|
D:ASP340
|
4.4
|
14.0
|
1.0
|
NE2
|
D:HIS272
|
4.5
|
13.2
|
1.0
|
ND2
|
D:ASN267
|
4.6
|
13.9
|
1.0
|
C5
|
D:XLS503
|
4.6
|
22.1
|
1.0
|
ND1
|
D:HIS272
|
4.7
|
12.3
|
1.0
|
C1
|
D:XLS503
|
4.8
|
24.3
|
1.0
|
CA
|
D:CA502
|
4.9
|
16.1
|
1.0
|
|
Calcium binding site 8 out
of 8 in 6t8e
Go back to
Calcium Binding Sites List in 6t8e
Calcium binding site 8 out
of 8 in the Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Crystal Structure of Native Xylose Isomerase From Piromyces E2 Grown in Yeast, in Complex with Xylose within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca502
b:16.1
occ:1.00
|
O
|
D:HOH775
|
1.9
|
19.8
|
1.0
|
OD2
|
D:ASP308
|
2.0
|
22.1
|
1.0
|
OD1
|
D:ASP310
|
2.0
|
15.9
|
1.0
|
OE2
|
D:GLU269
|
2.0
|
12.6
|
1.0
|
OD1
|
D:ASP308
|
2.5
|
22.9
|
1.0
|
CG
|
D:ASP308
|
2.5
|
19.1
|
1.0
|
CG
|
D:ASP310
|
2.9
|
14.8
|
1.0
|
CD
|
D:GLU269
|
3.0
|
12.1
|
1.0
|
NE2
|
D:HIS272
|
3.1
|
13.2
|
1.0
|
OD2
|
D:ASP310
|
3.1
|
17.2
|
1.0
|
OE1
|
D:GLU269
|
3.3
|
12.5
|
1.0
|
CD2
|
D:HIS272
|
3.6
|
11.9
|
1.0
|
O
|
D:HOH607
|
3.6
|
23.8
|
1.0
|
ND2
|
D:ASN299
|
3.8
|
10.4
|
1.0
|
O2
|
D:XLS503
|
4.0
|
21.1
|
1.0
|
CB
|
D:ASP308
|
4.0
|
16.7
|
1.0
|
CE1
|
D:HIS272
|
4.1
|
11.8
|
1.0
|
O1
|
D:XLS503
|
4.3
|
27.4
|
1.0
|
CG
|
D:GLU269
|
4.3
|
11.3
|
1.0
|
CB
|
D:ASP310
|
4.3
|
14.1
|
1.0
|
CB
|
D:ASN271
|
4.5
|
10.4
|
1.0
|
OD2
|
D:ASP340
|
4.5
|
14.9
|
1.0
|
CG
|
D:ASP340
|
4.7
|
13.1
|
1.0
|
CA
|
D:ASP310
|
4.8
|
12.8
|
1.0
|
CG
|
D:HIS272
|
4.8
|
11.7
|
1.0
|
OD1
|
D:ASP340
|
4.8
|
14.0
|
1.0
|
O
|
D:ASP340
|
4.8
|
11.8
|
1.0
|
CA
|
D:CA501
|
4.9
|
11.9
|
1.0
|
OD1
|
D:ASN271
|
4.9
|
10.7
|
1.0
|
N
|
D:ASP310
|
4.9
|
12.1
|
1.0
|
CA
|
D:ASP308
|
5.0
|
14.8
|
1.0
|
CG
|
D:ASN271
|
5.0
|
10.7
|
1.0
|
|
Reference:
M.Lee,
H.J.Rozeboom,
E.Keuning,
P.De Waal,
D.B.Janssen.
Disconnection Between in Vitro Catalytic Properties of Engineered Xylose Isomerases and Rates of Xylose Metabolism in Yeast Biotechnol Biofuels 2020.
ISSN: ESSN 1754-6834
DOI: 10.1186/S13068-019-1643-0
Page generated: Tue Jul 16 15:12:20 2024
|