Calcium in PDB 6trf: Chaetomium Thermophilum Udp-Glucose Glucosyl Transferase (Uggt) Purified From Cells Treated with Kifunensine.

The structure of Chaetomium Thermophilum Udp-Glucose Glucosyl Transferase (Uggt) Purified From Cells Treated with Kifunensine., PDB code: 6trf was solved by P.Roversi, N.Zitzmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	95.15 / 4.11
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	78.655, 148.928, 190.298, 90.00, 90.00, 90.00
R / Rfree (%)	25.5 / 31.5

The binding sites of Calcium atom in the Chaetomium Thermophilum Udp-Glucose Glucosyl Transferase (Uggt) Purified From Cells Treated with Kifunensine. (pdb code 6trf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Chaetomium Thermophilum Udp-Glucose Glucosyl Transferase (Uggt) Purified From Cells Treated with Kifunensine., PDB code: 6trf:

Calcium binding site 1 out of 1 in the Chaetomium Thermophilum Udp-Glucose Glucosyl Transferase (Uggt) Purified From Cells Treated with Kifunensine.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Chaetomium Thermophilum Udp-Glucose Glucosyl Transferase (Uggt) Purified From Cells Treated with Kifunensine. within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1603 b:0.3 occ:0.46 CG A:ASP1304 2.4 0.4 1.0 OD1 A:ASP1435 2.4 0.7 1.0 OD1 A:ASP1304 2.4 0.9 1.0 OD2 A:ASP1304 2.4 0.0 1.0 OD1 A:ASP1302 2.5 0.6 1.0 OD2 A:ASP1302 2.5 0.0 1.0 O A:ASP1435 2.6 0.0 1.0 CG A:ASP1302 2.6 0.8 1.0 O A:ASP1304 2.7 0.6 1.0 CG A:ASP1435 2.7 0.9 1.0 OD2 A:ASP1435 2.7 0.5 1.0 C A:ASP1304 2.8 0.3 1.0 O A:ASP1302 2.9 0.0 1.0 CG A:GLN1305 3.2 0.8 1.0 N A:GLN1305 3.3 0.8 1.0 CA A:ASP1304 3.4 0.7 1.0 CB A:ASP1304 3.4 0.8 1.0 N A:ASP1304 3.5 0.2 1.0 C A:ASP1435 3.5 0.0 1.0 CA A:ASP1435 3.6 0.7 1.0 CB A:ASP1435 3.7 0.0 1.0 CB A:ASP1302 3.8 0.0 1.0 C A:ASP1302 3.8 0.7 1.0 CA A:GLN1305 3.9 0.1 1.0 CB A:GLN1305 4.0 0.9 1.0 CA A:ASP1302 4.4 0.6 1.0 CD A:GLN1305 4.4 0.3 1.0 C A:ALA1303 4.5 0.3 1.0 NE2 A:GLN1305 4.6 0.2 1.0 N A:ALA1303 4.7 1.0 1.0 N A:LEU1436 4.8 0.0 1.0 O A:ILE1434 5.0 0.9 1.0

P.Roversi, N.Zitzmann. Clamping, Bending, and Twisting Inter-Domain Motions in the Misfold-Recognising Portion of Udp-Glucose:Glycoprotein Glucosyl-Transferase Biorxiv 2019.
DOI: 10.1101/2019.12.25.888438