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Calcium in PDB 6uwn: Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium

Calcium Binding Sites:

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>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 24;

Binding sites:

The binding sites of Calcium atom in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium (pdb code 6uwn). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 24 binding sites of Calcium where determined in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium, PDB code: 6uwn:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 24 in 6uwn

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Calcium binding site 1 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:57.4
occ:1.00
 O A:HOH501 2.5 48.9 1.0
OE1 A:GLU210 2.6 47.5 1.0
OD1 A:ASP184 2.9 42.6 1.0
OD2 A:ASP184 3.1 42.6 1.0
CG A:ASP184 3.4 42.6 1.0
OE2 A:GLU212 3.5 50.9 1.0
CD A:GLU210 3.8 47.5 1.0
OG A:SER124 3.8 50.8 1.0
O A:LEU185 4.2 42.2 1.0
CB A:SER124 4.2 50.8 1.0
CD A:GLU212 4.5 50.9 1.0
CG A:GLU210 4.6 47.5 1.0
OE2 A:GLU210 4.6 47.5 1.0
CG A:GLU212 4.8 50.9 1.0
CB A:ASP184 4.9 42.6 1.0
CE2 E:PHE232 5.0 43.6 1.0

Calcium binding site 2 out of 24 in 6uwn

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Calcium binding site 2 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:62.3
occ:1.00
 O A:ASP245 2.5 64.3 1.0
OE1 E:GLU266 2.5 76.0 1.0
OE2 A:GLU248 2.6 58.8 1.0
O A:ARG241 2.6 52.2 0.5
O A:ARG241 2.6 52.2 0.5
OE1 A:GLU248 2.9 58.8 1.0
CD E:GLU266 3.1 76.0 1.0
CD A:GLU248 3.1 58.8 1.0
OE2 E:GLU266 3.1 76.0 1.0
C A:ASP245 3.7 64.3 1.0
N A:ASP245 3.8 64.3 1.0
C A:ARG241 3.8 52.2 0.5
C A:ARG241 3.8 52.2 0.5
CG A:ARG241 4.1 52.2 0.5
CA A:ASP245 4.2 64.3 1.0
CG E:GLU266 4.4 76.0 1.0
CA A:ARG241 4.5 52.2 0.5
CA A:ARG241 4.5 52.2 0.5
CB A:ASP244 4.6 60.5 1.0
CB A:ARG241 4.6 52.2 0.5
CG A:GLU248 4.6 58.8 1.0
CB A:ARG241 4.6 52.2 0.5
CB A:ASP245 4.7 64.3 1.0
N A:GLY246 4.8 61.3 1.0
N A:SER242 4.8 51.6 1.0
C A:ASP244 4.9 60.5 1.0
CA A:SER242 4.9 51.6 1.0

Calcium binding site 3 out of 24 in 6uwn

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Calcium binding site 3 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca403

b:97.7
occ:1.00
 OD2 E:ASP305 2.5 92.4 1.0
OE2 A:GLU326 2.5 0.3 1.0
O A:GLY290 2.5 0.1 1.0
OD1 E:ASP305 2.6 92.4 1.0
CG E:ASP305 2.9 92.4 1.0
OE1 A:GLU326 3.1 0.3 1.0
CD A:GLU326 3.2 0.3 1.0
C A:GLY290 3.7 0.1 1.0
CA A:GLY290 4.4 0.1 1.0
CB E:ASP305 4.4 92.4 1.0
CE1 A:HIS286 4.5 0.1 1.0
O E:ASP305 4.6 92.4 1.0
CG A:GLU326 4.6 0.3 1.0
O E:PRO306 4.6 96.4 1.0
N A:VAL291 4.7 95.4 1.0
C E:ASP305 4.9 92.4 1.0
CA A:VAL291 4.9 95.4 1.0

Calcium binding site 4 out of 24 in 6uwn

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Calcium binding site 4 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca404

b:65.1
occ:1.00
 O E:ASP245 2.6 70.5 1.0
O E:ARG241 2.6 51.1 1.0
OE2 A:GLU266 2.6 84.7 1.0
CD A:GLU266 3.3 84.7 1.0
OE1 A:GLU266 3.3 84.7 1.0
C E:ARG241 3.5 51.1 1.0
C E:ASP245 3.6 70.5 1.0
N E:ASP245 3.7 70.5 1.0
OE2 E:GLU248 3.9 66.6 1.0
CA E:ASP245 4.2 70.5 1.0
CA E:ARG241 4.3 51.1 1.0
N E:SER242 4.4 49.1 1.0
CD E:GLU248 4.4 66.6 1.0
CA E:SER242 4.5 49.1 1.0
CB E:ASP244 4.6 66.5 1.0
CG E:GLU248 4.6 66.6 1.0
CB E:ARG241 4.6 51.1 1.0
CG A:GLU266 4.7 84.7 1.0
CB E:ASP245 4.7 70.5 1.0
N E:GLY246 4.8 67.2 1.0
N E:ASP244 4.8 66.5 1.0
C E:ASP244 4.8 66.5 1.0
CA E:ASP244 5.0 66.5 1.0

Calcium binding site 5 out of 24 in 6uwn

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Calcium binding site 5 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Ca401

b:51.4
occ:1.00
 OE2 E:GLU212 2.5 50.6 1.0
OD1 E:ASP184 2.5 46.1 1.0
OD2 E:ASP184 2.9 46.1 1.0
O E:HOH501 3.0 44.6 1.0
CG E:ASP184 3.1 46.1 1.0
OE2 E:GLU210 3.3 49.9 1.0
CD E:GLU212 3.7 50.6 1.0
OG E:SER124 4.0 49.3 1.0
CB E:SER124 4.1 49.3 1.0
OG E:SER126 4.1 46.9 1.0
CD E:GLU210 4.1 49.9 1.0
OE1 E:GLU212 4.3 50.6 1.0
O E:LEU185 4.3 36.3 1.0
CG E:GLU210 4.5 49.9 1.0
CB E:ASP184 4.6 46.1 1.0
CG E:GLU212 4.8 50.6 1.0
CE2 A:PHE232 4.9 44.2 1.0
CB E:SER126 5.0 46.9 1.0

Calcium binding site 6 out of 24 in 6uwn

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Calcium binding site 6 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Ca402

b:0.2
occ:1.00
 OD2 A:ASP305 2.5 95.2 1.0
OE2 E:GLU326 2.6 0.1 1.0
O E:GLY290 2.6 99.8 1.0
OD1 A:ASP305 2.8 95.2 1.0
CG A:ASP305 3.0 95.2 1.0
OE1 E:GLU326 3.0 0.1 1.0
CD E:GLU326 3.2 0.1 1.0
C E:GLY290 3.6 99.8 1.0
CA E:GLY290 4.1 99.8 1.0
O A:PRO306 4.4 0.2 1.0
CB A:ASP305 4.5 95.2 1.0
CG E:GLU326 4.7 0.1 1.0
O A:ASP305 4.7 95.2 1.0
N E:VAL291 4.8 89.7 1.0
NE2 E:HIS286 5.0 0.9 1.0

Calcium binding site 7 out of 24 in 6uwn

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Calcium binding site 7 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca401

b:56.3
occ:1.00
 OD1 B:ASP184 2.6 38.1 1.0
OD2 B:ASP184 2.8 38.1 1.0
CG B:ASP184 3.1 38.1 1.0
OE2 B:GLU212 3.1 44.1 1.0
OE2 B:GLU210 3.3 37.8 1.0
OE1 B:GLU212 3.7 44.1 1.0
CD B:GLU210 3.7 37.8 1.0
CD B:GLU212 3.8 44.1 1.0
OG B:SER124 3.8 42.2 1.0
OE1 B:GLU210 4.0 37.8 1.0
O B:LEU185 4.2 39.7 1.0
CB B:SER124 4.4 42.2 1.0
CG B:GLU210 4.6 37.8 1.0
CB B:ASP184 4.6 38.1 1.0

Calcium binding site 8 out of 24 in 6uwn

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Calcium binding site 8 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca402

b:0.9
occ:1.00
 OE2 F:GLU266 2.4 87.8 1.0
O B:ARG241 2.7 58.3 1.0
O B:ASP245 3.1 71.8 1.0
N B:ASP245 3.3 71.8 1.0
CD F:GLU266 3.4 87.8 1.0
CB B:ASP244 3.6 68.9 1.0
OE1 B:GLU248 3.7 73.4 1.0
C B:ARG241 3.8 58.3 1.0
OE1 F:GLU266 3.9 87.8 1.0
C B:ASP245 4.0 71.8 1.0
CA B:ASP245 4.1 71.8 1.0
N B:ASP244 4.2 68.9 1.0
CA B:ASP244 4.2 68.9 1.0
OE2 B:GLU248 4.2 73.4 1.0
C B:ASP244 4.2 68.9 1.0
CD B:GLU248 4.4 73.4 1.0
CG F:GLU266 4.4 87.8 1.0
CA B:ARG241 4.4 58.3 1.0
CB B:ASP245 4.4 71.8 1.0
N B:SER242 4.8 58.7 1.0
CB B:ARG241 4.8 58.3 1.0
CA B:SER242 5.0 58.7 1.0

Calcium binding site 9 out of 24 in 6uwn

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Calcium binding site 9 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca403

b:0.2
occ:1.00
 OD1 F:ASP305 2.5 92.7 1.0
O B:GLY290 2.6 98.9 1.0
OE2 B:GLU326 3.0 96.1 1.0
OD2 F:ASP305 3.1 92.7 1.0
CG F:ASP305 3.1 92.7 1.0
CE1 B:HIS286 3.2 0.8 1.0
C B:GLY290 3.7 98.9 1.0
CD B:GLU326 3.9 96.1 1.0
OE1 B:GLU326 4.0 96.1 1.0
ND1 B:HIS286 4.1 0.8 1.0
NE2 B:HIS286 4.1 0.8 1.0
CA B:GLY290 4.2 98.9 1.0
O F:PRO306 4.3 0.5 1.0
CB F:ASP305 4.6 92.7 1.0
O F:ASP305 4.8 92.7 1.0
N B:VAL291 4.9 90.5 1.0
C F:ASP305 4.9 92.7 1.0

Calcium binding site 10 out of 24 in 6uwn

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Calcium binding site 10 out of 24 in the Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of Mthk N-Terminal Truncation Rck Domain State 1 Bound with Calcium within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Ca401

b:96.2
occ:1.00
 OD2 B:ASP305 2.4 94.7 1.0
OE2 F:GLU326 2.6 0.6 1.0
CG B:ASP305 3.0 94.7 1.0
OD1 B:ASP305 3.0 94.7 1.0
OE1 F:GLU326 3.2 0.6 1.0
CD F:GLU326 3.3 0.6 1.0
O F:GLY290 3.4 0.1 1.0
O B:ASP305 4.3 94.7 1.0
CB B:ASP305 4.3 94.7 1.0
O B:PRO306 4.4 0.2 1.0
C F:GLY290 4.4 0.1 1.0
CE F:LYS323 4.6 0.2 1.0
CD F:LYS323 4.7 0.2 1.0
CA B:PRO307 4.7 0.4 1.0
CA F:GLY290 4.7 0.1 1.0
C B:ASP305 4.7 94.7 1.0
CG F:GLU326 4.8 0.6 1.0
NE2 F:HIS286 4.8 0.0 1.0
C B:PRO306 4.9 0.2 1.0

Reference:

C.Fan, N.Sukomon, E.Flood, J.Rheinberger, T.W.Allen, C.M.Nimigean. Ball-and-Chain Inactivation in A Calcium-Gated Potassium Channel Nature 2020.
ISSN: ESSN 1476-4687
Page generated: Tue Jul 16 16:07:14 2024

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