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Calcium in PDB 6uzz: Structure of Human KCNQ1-Cam Complex

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Human KCNQ1-Cam Complex (pdb code 6uzz). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 8 binding sites of Calcium where determined in the Structure of Human KCNQ1-Cam Complex, PDB code: 6uzz:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Calcium binding site 1 out of 8 in 6uzz

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Calcium binding site 1 out of 8 in the Structure of Human KCNQ1-Cam Complex


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Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Human KCNQ1-Cam Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca201

b:0.3
occ:1.00
 OD2 B:ASP25 2.5 0.1 1.0
OE2 B:GLU32 2.5 0.2 1.0
OE1 B:GLU32 2.5 0.2 1.0
O B:THR27 2.6 0.6 1.0
CD B:GLU32 2.9 0.2 1.0
CB B:ASP25 3.0 0.1 1.0
CG B:ASP25 3.1 0.1 1.0
OD1 B:ASP21 3.3 0.1 1.0
OG1 B:THR27 3.6 0.6 1.0
OD1 B:ASP23 3.6 0.6 1.0
C B:THR27 3.6 0.6 1.0
N B:THR27 4.2 0.6 1.0
OD2 B:ASP23 4.3 0.6 1.0
CA B:THR27 4.4 0.6 1.0
OD1 B:ASP25 4.4 0.1 1.0
CG B:ASP23 4.4 0.6 1.0
CG B:GLU32 4.4 0.2 1.0
CA B:ASP25 4.4 0.1 1.0
OG1 B:THR29 4.5 0.8 1.0
CG B:ASP21 4.5 0.1 1.0
N B:ILE28 4.5 0.8 1.0
CB B:THR27 4.6 0.6 1.0
O B:ASP21 4.6 0.1 1.0
CA B:ILE28 4.7 0.8 1.0
N B:ASP25 4.8 0.1 1.0
N B:GLY26 4.9 0.1 1.0
N B:THR29 5.0 0.8 1.0

Calcium binding site 2 out of 8 in 6uzz

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Calcium binding site 2 out of 8 in the Structure of Human KCNQ1-Cam Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of Human KCNQ1-Cam Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca202

b:0.0
occ:0.83
 O B:THR63 2.5 0.9 1.0
OE2 B:GLU68 2.5 0.8 1.0
OD1 B:ASN61 2.5 0.1 1.0
OE1 B:GLU68 2.6 0.8 1.0
CD B:GLU68 2.9 0.8 1.0
CB B:ASP57 3.3 0.8 1.0
CG B:ASN61 3.4 0.1 1.0
CB B:ASP59 3.6 0.5 1.0
ND2 B:ASN61 3.7 0.1 1.0
C B:THR63 3.7 0.9 1.0
N B:ASP59 4.1 0.5 1.0
OD2 B:ASP57 4.2 0.8 1.0
CG B:ASP57 4.3 0.8 1.0
CA B:ASP57 4.3 0.8 1.0
CA B:ASP59 4.4 0.5 1.0
N B:ASP65 4.4 0.3 1.0
N B:THR63 4.4 0.9 1.0
CG B:GLU68 4.4 0.8 1.0
OG1 B:THR63 4.6 0.9 1.0
N B:ASN61 4.6 0.1 1.0
N B:ILE64 4.6 0.8 1.0
CA B:ILE64 4.6 0.8 1.0
N B:ALA58 4.6 0.9 1.0
CA B:THR63 4.7 0.9 1.0
N B:GLY60 4.7 0.7 1.0
C B:ASP59 4.8 0.5 1.0
N B:GLY62 4.8 0.3 1.0
CB B:ASN61 4.8 0.1 1.0
C B:ASP57 5.0 0.8 1.0
C B:ILE64 5.0 0.8 1.0

Calcium binding site 3 out of 8 in 6uzz

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Calcium binding site 3 out of 8 in the Structure of Human KCNQ1-Cam Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Structure of Human KCNQ1-Cam Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca201

b:0.1
occ:1.00
 OD2 D:ASP25 2.5 0.9 1.0
OE2 D:GLU32 2.5 0.4 1.0
OE1 D:GLU32 2.5 0.4 1.0
O D:THR27 2.6 0.4 1.0
CD D:GLU32 2.9 0.4 1.0
CB D:ASP25 3.0 0.9 1.0
CG D:ASP25 3.1 0.9 1.0
OD1 D:ASP21 3.3 0.8 1.0
OG1 D:THR27 3.6 0.4 1.0
OD1 D:ASP23 3.6 0.5 1.0
C D:THR27 3.6 0.4 1.0
N D:THR27 4.2 0.4 1.0
OD2 D:ASP23 4.3 0.5 1.0
CA D:THR27 4.4 0.4 1.0
OD1 D:ASP25 4.4 0.9 1.0
CG D:ASP23 4.4 0.5 1.0
CG D:GLU32 4.4 0.4 1.0
CA D:ASP25 4.4 0.9 1.0
OG1 D:THR29 4.5 0.1 1.0
CG D:ASP21 4.5 0.8 1.0
N D:ILE28 4.5 0.0 1.0
CB D:THR27 4.6 0.4 1.0
O D:ASP21 4.6 0.8 1.0
CA D:ILE28 4.7 0.0 1.0
N D:ASP25 4.8 0.9 1.0
N D:GLY26 4.9 0.2 1.0
N D:THR29 5.0 0.1 1.0

Calcium binding site 4 out of 8 in 6uzz

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Calcium binding site 4 out of 8 in the Structure of Human KCNQ1-Cam Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Structure of Human KCNQ1-Cam Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca202

b:0.4
occ:0.83
 O D:THR63 2.5 0.7 1.0
OE2 D:GLU68 2.5 0.6 1.0
OD1 D:ASN61 2.5 0.1 1.0
OE1 D:GLU68 2.6 0.6 1.0
CD D:GLU68 2.9 0.6 1.0
CB D:ASP57 3.3 0.9 1.0
CG D:ASN61 3.4 0.1 1.0
CB D:ASP59 3.6 0.8 1.0
ND2 D:ASN61 3.7 0.1 1.0
C D:THR63 3.7 0.7 1.0
N D:ASP59 4.1 0.8 1.0
OD2 D:ASP57 4.2 0.9 1.0
CG D:ASP57 4.3 0.9 1.0
CA D:ASP57 4.3 0.9 1.0
CA D:ASP59 4.4 0.8 1.0
N D:ASP65 4.4 0.1 1.0
N D:THR63 4.4 0.7 1.0
CG D:GLU68 4.4 0.6 1.0
OG1 D:THR63 4.6 0.7 1.0
N D:ASN61 4.6 0.1 1.0
N D:ILE64 4.6 0.7 1.0
CA D:ILE64 4.6 0.7 1.0
N D:ALA58 4.6 0.0 1.0
CA D:THR63 4.7 0.7 1.0
N D:GLY60 4.7 0.1 1.0
C D:ASP59 4.8 0.8 1.0
N D:GLY62 4.8 0.0 1.0
CB D:ASN61 4.8 0.1 1.0
C D:ASP57 5.0 0.9 1.0
C D:ILE64 5.0 0.7 1.0

Calcium binding site 5 out of 8 in 6uzz

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Calcium binding site 5 out of 8 in the Structure of Human KCNQ1-Cam Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Structure of Human KCNQ1-Cam Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Ca201

b:0.7
occ:1.00
 OD2 F:ASP25 2.5 0.5 1.0
OE2 F:GLU32 2.5 0.1 1.0
OE1 F:GLU32 2.5 0.1 1.0
O F:THR27 2.6 0.5 1.0
CD F:GLU32 2.9 0.1 1.0
CB F:ASP25 3.0 0.5 1.0
CG F:ASP25 3.1 0.5 1.0
OD1 F:ASP21 3.3 0.1 1.0
OG1 F:THR27 3.6 0.5 1.0
OD1 F:ASP23 3.6 0.2 1.0
C F:THR27 3.6 0.5 1.0
N F:THR27 4.2 0.5 1.0
OD2 F:ASP23 4.3 0.2 1.0
CA F:THR27 4.4 0.5 1.0
OD1 F:ASP25 4.4 0.5 1.0
CG F:ASP23 4.4 0.2 1.0
CG F:GLU32 4.4 0.1 1.0
CA F:ASP25 4.4 0.5 1.0
OG1 F:THR29 4.5 0.5 1.0
CG F:ASP21 4.5 0.1 1.0
N F:ILE28 4.5 0.7 1.0
CB F:THR27 4.6 0.5 1.0
O F:ASP21 4.6 0.1 1.0
CA F:ILE28 4.7 0.7 1.0
N F:ASP25 4.8 0.5 1.0
N F:GLY26 4.9 0.1 1.0
N F:THR29 5.0 0.5 1.0

Calcium binding site 6 out of 8 in 6uzz

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Calcium binding site 6 out of 8 in the Structure of Human KCNQ1-Cam Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Structure of Human KCNQ1-Cam Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Ca202

b:0.7
occ:0.83
 O F:THR63 2.5 0.8 1.0
OE2 F:GLU68 2.5 0.2 1.0
OD1 F:ASN61 2.5 0.7 1.0
OE1 F:GLU68 2.6 0.2 1.0
CD F:GLU68 2.9 0.2 1.0
CB F:ASP57 3.3 0.2 1.0
CG F:ASN61 3.4 0.7 1.0
CB F:ASP59 3.6 0.4 1.0
ND2 F:ASN61 3.7 0.7 1.0
C F:THR63 3.7 0.8 1.0
N F:ASP59 4.1 0.4 1.0
OD2 F:ASP57 4.2 0.2 1.0
CG F:ASP57 4.3 0.2 1.0
CA F:ASP57 4.3 0.2 1.0
CA F:ASP59 4.4 0.4 1.0
N F:ASP65 4.4 0.8 1.0
N F:THR63 4.4 0.8 1.0
CG F:GLU68 4.4 0.2 1.0
OG1 F:THR63 4.6 0.8 1.0
N F:ASN61 4.6 0.7 1.0
N F:ILE64 4.6 0.7 1.0
CA F:ILE64 4.6 0.7 1.0
N F:ALA58 4.6 0.3 1.0
CA F:THR63 4.7 0.8 1.0
N F:GLY60 4.7 0.5 1.0
C F:ASP59 4.8 0.4 1.0
N F:GLY62 4.8 0.6 1.0
CB F:ASN61 4.8 0.7 1.0
C F:ASP57 5.0 0.2 1.0
C F:ILE64 5.0 0.7 1.0

Calcium binding site 7 out of 8 in 6uzz

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Calcium binding site 7 out of 8 in the Structure of Human KCNQ1-Cam Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Structure of Human KCNQ1-Cam Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Ca201

b:0.0
occ:1.00
 OD2 H:ASP25 2.5 0.4 1.0
OE2 H:GLU32 2.5 0.5 1.0
OE1 H:GLU32 2.5 0.5 1.0
O H:THR27 2.6 0.2 1.0
CD H:GLU32 2.9 0.5 1.0
CB H:ASP25 3.0 0.4 1.0
CG H:ASP25 3.1 0.4 1.0
OD1 H:ASP21 3.3 0.6 1.0
OG1 H:THR27 3.6 0.2 1.0
OD1 H:ASP23 3.6 0.2 1.0
C H:THR27 3.6 0.2 1.0
N H:THR27 4.2 0.2 1.0
OD2 H:ASP23 4.3 0.2 1.0
CA H:THR27 4.4 0.2 1.0
OD1 H:ASP25 4.4 0.4 1.0
CG H:ASP23 4.4 0.2 1.0
CG H:GLU32 4.4 0.5 1.0
CA H:ASP25 4.4 0.4 1.0
OG1 H:THR29 4.5 0.9 1.0
CG H:ASP21 4.5 0.6 1.0
N H:ILE28 4.5 0.2 1.0
CB H:THR27 4.6 0.2 1.0
O H:ASP21 4.6 0.6 1.0
CA H:ILE28 4.7 0.2 1.0
N H:ASP25 4.8 0.4 1.0
N H:GLY26 4.9 0.6 1.0
N H:THR29 5.0 0.9 1.0

Calcium binding site 8 out of 8 in 6uzz

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Calcium binding site 8 out of 8 in the Structure of Human KCNQ1-Cam Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Structure of Human KCNQ1-Cam Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Ca202

b:0.7
occ:0.83
 O H:THR63 2.5 0.5 1.0
OE2 H:GLU68 2.5 0.3 1.0
OD1 H:ASN61 2.5 0.8 1.0
OE1 H:GLU68 2.6 0.3 1.0
CD H:GLU68 2.9 0.3 1.0
CB H:ASP57 3.3 0.4 1.0
CG H:ASN61 3.4 0.8 1.0
CB H:ASP59 3.6 0.3 1.0
ND2 H:ASN61 3.7 0.8 1.0
C H:THR63 3.7 0.5 1.0
N H:ASP59 4.1 0.3 1.0
OD2 H:ASP57 4.2 0.4 1.0
CG H:ASP57 4.3 0.4 1.0
CA H:ASP57 4.3 0.4 1.0
CA H:ASP59 4.4 0.3 1.0
N H:ASP65 4.4 0.7 1.0
N H:THR63 4.4 0.5 1.0
CG H:GLU68 4.4 0.3 1.0
OG1 H:THR63 4.6 0.5 1.0
N H:ASN61 4.6 0.8 1.0
N H:ILE64 4.6 0.5 1.0
CA H:ILE64 4.6 0.5 1.0
N H:ALA58 4.6 0.5 1.0
CA H:THR63 4.7 0.5 1.0
N H:GLY60 4.7 0.4 1.0
C H:ASP59 4.8 0.3 1.0
N H:GLY62 4.8 0.5 1.0
CB H:ASN61 4.8 0.8 1.0
C H:ASP57 5.0 0.4 1.0
C H:ILE64 5.0 0.5 1.0

Reference:

R.Mackinnon, J.Sun. Structural Basis of Human KCNQ1 Modulation and Gating To Be Published.
Page generated: Tue Jul 16 16:23:55 2024

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