Calcium in PDB 6v9v: Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng

The structure of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng also contains other interesting chemical elements:

Fluorine

(F)

8 atoms

The binding sites of Calcium atom in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng (pdb code 6v9v). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng, PDB code: 6v9v:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1202 b:95.2 occ:1.00 OE1 A:GLN791 2.5 99.1 1.0 OE1 A:GLU808 2.5 83.9 1.0 OD1 A:ASN805 2.6 92.3 1.0 OE2 A:GLU808 2.7 83.9 1.0 CD A:GLU808 3.0 83.9 1.0 OE2 A:GLU788 3.1 92.5 1.0 NE2 A:GLN791 3.1 99.1 1.0 CD A:GLN791 3.2 99.1 1.0 OE1 A:GLU788 3.5 92.5 1.0 CD A:GLU788 3.7 92.5 1.0 CG A:ASN805 3.8 92.3 1.0 CG A:GLU808 4.5 83.9 1.0 CG A:GLN791 4.7 99.1 1.0 CA A:ASN805 4.7 92.3 1.0 ND2 A:ASN805 4.7 92.3 1.0 CB A:ASN805 4.8 92.3 1.0 OG A:SER804 4.9 93.6 1.0

Calcium binding site 2 out of 4 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1202 b:0.2 occ:1.00 OE1 B:GLN791 2.5 99.1 1.0 OE1 B:GLU808 2.5 83.9 1.0 OD1 B:ASN805 2.5 92.3 1.0 OE2 B:GLU808 2.7 83.9 1.0 CD B:GLU808 3.0 83.9 1.0 OE2 B:GLU788 3.1 92.5 1.0 NE2 B:GLN791 3.2 99.1 1.0 CD B:GLN791 3.2 99.1 1.0 OE1 B:GLU788 3.5 92.5 1.0 CD B:GLU788 3.7 92.5 1.0 CG B:ASN805 3.8 92.3 1.0 CG B:GLU808 4.5 83.9 1.0 ND2 B:ASN805 4.6 92.3 1.0 CA B:ASN805 4.6 92.3 1.0 CG B:GLN791 4.7 99.1 1.0 CB B:ASN805 4.7 92.3 1.0 OG B:SER804 4.8 93.6 1.0 CE1 B:TYR799 5.0 1.0 1.0

Calcium binding site 3 out of 4 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca1202 b:1.0 occ:1.00 OE1 D:GLN791 2.5 99.1 1.0 OD1 D:ASN805 2.5 92.3 1.0 OE1 D:GLU808 2.6 83.9 1.0 OE2 D:GLU808 2.8 83.9 1.0 CD D:GLU808 3.0 83.9 1.0 OE2 D:GLU788 3.1 92.5 1.0 NE2 D:GLN791 3.2 99.1 1.0 CD D:GLN791 3.2 99.1 1.0 OE1 D:GLU788 3.5 92.5 1.0 CD D:GLU788 3.7 92.5 1.0 CG D:ASN805 3.8 92.3 1.0 CG D:GLU808 4.5 83.9 1.0 ND2 D:ASN805 4.6 92.3 1.0 CA D:ASN805 4.6 92.3 1.0 CG D:GLN791 4.7 99.1 1.0 CB D:ASN805 4.7 92.3 1.0 OG D:SER804 4.8 93.6 1.0 CE1 D:TYR799 5.0 1.0 1.0

Calcium binding site 4 out of 4 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca1202 b:99.5 occ:1.00 OE1 C:GLN791 2.5 99.1 1.0 OE1 C:GLU808 2.5 83.9 1.0 OD1 C:ASN805 2.5 92.3 1.0 OE2 C:GLU808 2.7 83.9 1.0 CD C:GLU808 3.0 83.9 1.0 OE2 C:GLU788 3.1 92.5 1.0 NE2 C:GLN791 3.2 99.1 1.0 CD C:GLN791 3.2 99.1 1.0 OE1 C:GLU788 3.5 92.5 1.0 CD C:GLU788 3.7 92.5 1.0 CG C:ASN805 3.8 92.3 1.0 CG C:GLU808 4.5 83.9 1.0 ND2 C:ASN805 4.6 92.3 1.0 CA C:ASN805 4.6 92.3 1.0 CG C:GLN791 4.7 99.1 1.0 CB C:ASN805 4.7 92.3 1.0 OG C:SER804 4.8 93.6 1.0 CE1 C:TYR799 5.0 1.0 1.0

J.Zhao, J.Zhao. N/A N/A.