Calcium in PDB 6vb8: Crystal Structure of A Lectin From Canavalia Brasiliensis Seed (Conbr) Complexed with Indole-3-Acetic Acid

The structure of Crystal Structure of A Lectin From Canavalia Brasiliensis Seed (Conbr) Complexed with Indole-3-Acetic Acid, PDB code: 6vb8 was solved by E.H.S.Bezerra, P.P.Queiroz, F.M.S.Da Silva, M.S.Girao, M.V.Sales, C.P.S.Paiva, V.N.Freire, B.A.M.Rocha, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.69 / 2.20
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	67.806, 72.427, 99.272, 90.00, 90.00, 90.00
R / Rfree (%)	19.9 / 23.6

The structure of Crystal Structure of A Lectin From Canavalia Brasiliensis Seed (Conbr) Complexed with Indole-3-Acetic Acid also contains other interesting chemical elements:

Manganese	(Mn)	1 atom
Chlorine	(Cl)	2 atoms

The binding sites of Calcium atom in the Crystal Structure of A Lectin From Canavalia Brasiliensis Seed (Conbr) Complexed with Indole-3-Acetic Acid (pdb code 6vb8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Lectin From Canavalia Brasiliensis Seed (Conbr) Complexed with Indole-3-Acetic Acid, PDB code: 6vb8:

Calcium binding site 1 out of 1 in the Crystal Structure of A Lectin From Canavalia Brasiliensis Seed (Conbr) Complexed with Indole-3-Acetic Acid


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Lectin From Canavalia Brasiliensis Seed (Conbr) Complexed with Indole-3-Acetic Acid within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca302 b:43.9 occ:1.00 O A:HOH415 2.3 45.8 1.0 O A:HOH427 2.3 32.2 1.0 OD1 A:ASN14 2.4 51.8 1.0 O A:TYR12 2.4 49.8 1.0 OD2 A:ASP19 2.4 51.3 1.0 OD1 A:ASP10 2.4 43.3 1.0 OD2 A:ASP10 2.5 43.9 1.0 CG A:ASP10 2.8 43.3 1.0 CG A:ASN14 3.5 55.0 1.0 CG A:ASP19 3.5 51.6 1.0 C A:TYR12 3.6 50.2 1.0 OD1 A:ASP19 4.0 49.9 1.0 N A:ASN14 4.1 56.1 1.0 MN A:MN303 4.2 60.1 1.0 CB A:ASN14 4.2 56.9 1.0 CB A:ASP10 4.3 41.7 1.0 CA A:TYR12 4.4 48.5 1.0 CB A:TYR12 4.5 48.5 1.0 O A:HOH412 4.5 38.4 1.0 N A:TYR12 4.5 45.3 1.0 CE1 A:HIS24 4.6 47.8 1.0 ND2 A:ASN14 4.6 54.4 1.0 N A:PRO13 4.6 52.2 1.0 O A:ASP208 4.6 41.2 1.0 O A:ARG228 4.7 49.1 1.0 OD1 A:ASP208 4.7 47.9 1.0 C A:PRO13 4.7 55.6 1.0 CA A:PRO13 4.7 53.9 1.0 CB A:ARG228 4.7 52.2 1.0 NE2 A:HIS24 4.8 46.6 1.0 CA A:ASN14 4.8 58.6 1.0 CA A:ARG228 4.8 50.5 1.0 CB A:ASP19 4.8 53.5 1.0 CD2 A:TYR12 4.9 52.4 1.0

E.H.S.Bezerra, M.V.Sales, M.S.Girao, F.M.S.Da Silva, P.P.Queiroz, C.P.S.Paiva, V.N.Freire, B.A.M.Rocha. Structural Insights Into Phytohormone Interaction to Plant Lectin Conbr To Be Published.