Atomistry » Calcium » PDB 7aq0-7b1g » 7azr
Atomistry »
  Calcium »
    PDB 7aq0-7b1g »
      7azr »

Calcium in PDB 7azr: Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn

Enzymatic activity of Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn

All present enzymatic activity of Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn:
1.15.1.1;

Protein crystallography data

The structure of Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn, PDB code: 7azr was solved by A.Ponce-Salvatierra, J.A.Hermoso, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.15 / 2.10
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 162.65, 162.65, 44, 90, 90, 90
R / Rfree (%) 17.3 / 19.3

Other elements in 7azr:

The structure of Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn also contains other interesting chemical elements:

Manganese (Mn) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn (pdb code 7azr). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn, PDB code: 7azr:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 7azr

Go back to Calcium Binding Sites List in 7azr
Calcium binding site 1 out of 2 in the Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:87.1
occ:1.00
 CZ A:TYR27 4.2 48.1 1.0
CE2 A:TYR27 4.3 48.9 1.0
OE1 A:GLU26 4.4 69.1 1.0
CB A:GLU26 4.4 56.7 1.0
OH A:TYR27 4.4 49.2 1.0
CE1 A:TYR27 4.6 45.8 1.0
CD2 A:TYR27 4.7 47.1 1.0
CD A:GLU26 4.9 67.6 1.0

Calcium binding site 2 out of 2 in 7azr

Go back to Calcium Binding Sites List in 7azr
Calcium binding site 2 out of 2 in the Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of the Iron/Manganese Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus Complex with Mn within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Ca302

b:84.2
occ:1.00
 O E:HOH437 2.2 61.9 1.0
O E:HOH401 2.3 67.6 1.0
OD1 E:ASP94 2.6 66.4 1.0
OD1 E:ASP188 3.7 50.2 1.0
CG E:ASP94 3.8 63.1 1.0
O E:ASP188 4.4 39.1 1.0
OD2 E:ASP94 4.5 65.4 1.0
CG E:ASP188 4.6 45.8 1.0
CB E:ASP94 4.7 60.9 1.0
OD2 E:ASP188 4.8 52.0 1.0
CA E:ASP94 4.9 56.1 1.0

Reference:

A.Ponce-Salvatierra, C.Di Capua, J.Gonzalez, N.Cortez, J.A.Hermoso. Structural and Functional Characterization of the Cambialistic Superoxide Dismutase From Rhodobacter Capsulatus. To Be Published.
Page generated: Thu Jul 18 23:10:12 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy