Atomistry » Calcium » PDB 7d4p-7dkx » 7d4q
Atomistry »
  Calcium »
    PDB 7d4p-7dkx »
      7d4q »

Calcium in PDB 7d4q: Structure of Human TRPC5 in Complex with Hc-070

Other elements in 7d4q:

The structure of Structure of Human TRPC5 in Complex with Hc-070 also contains other interesting chemical elements:

Chlorine (Cl) 8 atoms
Zinc (Zn) 4 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Human TRPC5 in Complex with Hc-070 (pdb code 7d4q). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Structure of Human TRPC5 in Complex with Hc-070, PDB code: 7d4q:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 7d4q

Go back to Calcium Binding Sites List in 7d4q
Calcium binding site 1 out of 4 in the Structure of Human TRPC5 in Complex with Hc-070


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca805

b:138.1
occ:1.00
OD1 A:ASN436 2.6 149.7 1.0
OD2 A:ASP439 2.8 140.2 1.0
OE1 A:GLU418 3.2 146.0 1.0
OE1 A:GLU421 3.5 160.3 1.0
NH2 A:ARG492 3.5 116.5 1.0
CG A:ASN436 3.8 151.3 1.0
CD A:GLU418 3.9 149.6 1.0
OE2 A:GLU418 4.0 148.1 1.0
CG A:ASP439 4.0 133.5 1.0
CD A:GLU421 4.3 167.4 1.0
OE2 A:GLU421 4.3 169.0 1.0
OD2 A:ASP433 4.5 159.2 1.0
ND2 A:ASN436 4.7 157.7 1.0
CA A:ASN436 4.7 138.2 1.0
CB A:ASP439 4.7 127.2 1.0
CB A:ASN436 4.8 145.9 1.0
CZ A:ARG492 4.8 113.4 1.0
OD1 A:ASP439 4.9 132.2 1.0
N A:ASN436 5.0 139.5 1.0

Calcium binding site 2 out of 4 in 7d4q

Go back to Calcium Binding Sites List in 7d4q
Calcium binding site 2 out of 4 in the Structure of Human TRPC5 in Complex with Hc-070


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca805

b:138.1
occ:1.00
OD1 B:ASN436 2.6 149.7 1.0
OD2 B:ASP439 2.8 140.2 1.0
OE1 B:GLU418 3.2 146.0 1.0
OE1 B:GLU421 3.5 160.3 1.0
NH2 B:ARG492 3.5 116.5 1.0
CG B:ASN436 3.8 151.3 1.0
CD B:GLU418 3.9 149.6 1.0
OE2 B:GLU418 4.0 148.1 1.0
CG B:ASP439 4.0 133.5 1.0
CD B:GLU421 4.3 167.4 1.0
OE2 B:GLU421 4.3 169.0 1.0
OD2 B:ASP433 4.5 159.2 1.0
ND2 B:ASN436 4.7 157.7 1.0
CA B:ASN436 4.7 138.2 1.0
CB B:ASP439 4.7 127.2 1.0
CB B:ASN436 4.8 145.9 1.0
CZ B:ARG492 4.8 113.4 1.0
OD1 B:ASP439 4.9 132.2 1.0
N B:ASN436 5.0 139.5 1.0

Calcium binding site 3 out of 4 in 7d4q

Go back to Calcium Binding Sites List in 7d4q
Calcium binding site 3 out of 4 in the Structure of Human TRPC5 in Complex with Hc-070


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca805

b:138.1
occ:1.00
OD1 C:ASN436 2.6 149.7 1.0
OD2 C:ASP439 2.8 140.2 1.0
OE1 C:GLU418 3.2 146.0 1.0
OE1 C:GLU421 3.5 160.3 1.0
NH2 C:ARG492 3.5 116.5 1.0
CG C:ASN436 3.8 151.3 1.0
CD C:GLU418 3.9 149.6 1.0
OE2 C:GLU418 4.0 148.1 1.0
CG C:ASP439 4.0 133.5 1.0
CD C:GLU421 4.3 167.4 1.0
OE2 C:GLU421 4.3 169.0 1.0
OD2 C:ASP433 4.5 159.2 1.0
ND2 C:ASN436 4.7 157.7 1.0
CA C:ASN436 4.7 138.2 1.0
CB C:ASP439 4.7 127.2 1.0
CB C:ASN436 4.8 145.9 1.0
CZ C:ARG492 4.8 113.4 1.0
OD1 C:ASP439 4.9 132.2 1.0
N C:ASN436 5.0 139.5 1.0

Calcium binding site 4 out of 4 in 7d4q

Go back to Calcium Binding Sites List in 7d4q
Calcium binding site 4 out of 4 in the Structure of Human TRPC5 in Complex with Hc-070


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca805

b:138.1
occ:1.00
OD1 D:ASN436 2.6 149.7 1.0
OD2 D:ASP439 2.8 140.2 1.0
OE1 D:GLU418 3.2 146.0 1.0
OE1 D:GLU421 3.5 160.3 1.0
NH2 D:ARG492 3.5 116.5 1.0
CG D:ASN436 3.8 151.3 1.0
CD D:GLU418 3.9 149.6 1.0
OE2 D:GLU418 4.0 148.1 1.0
CG D:ASP439 4.0 133.5 1.0
CD D:GLU421 4.3 167.4 1.0
OE2 D:GLU421 4.3 169.0 1.0
OD2 D:ASP433 4.5 159.2 1.0
ND2 D:ASN436 4.7 157.7 1.0
CA D:ASN436 4.7 138.2 1.0
CB D:ASP439 4.7 127.2 1.0
CB D:ASN436 4.8 145.9 1.0
CZ D:ARG492 4.8 113.4 1.0
OD1 D:ASP439 4.9 132.2 1.0
N D:ASN436 5.0 139.5 1.0

Reference:

L.Chen, K.Song, M.Wei, W.Guo. Structure of Human TRPC5 in Complex with Hc-070 To Be Published.
Page generated: Thu Jul 18 23:55:33 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy