Calcium in PDB 7d4q: Structure of Human TRPC5 in Complex with Hc-070
Other elements in 7d4q:
The structure of Structure of Human TRPC5 in Complex with Hc-070 also contains other interesting chemical elements:
Calcium Binding Sites:
The binding sites of Calcium atom in the Structure of Human TRPC5 in Complex with Hc-070
(pdb code 7d4q). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the
Structure of Human TRPC5 in Complex with Hc-070, PDB code: 7d4q:
Jump to Calcium binding site number:
1;
2;
3;
4;
Calcium binding site 1 out
of 4 in 7d4q
Go back to
Calcium Binding Sites List in 7d4q
Calcium binding site 1 out
of 4 in the Structure of Human TRPC5 in Complex with Hc-070
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca805
b:138.1
occ:1.00
|
OD1
|
A:ASN436
|
2.6
|
149.7
|
1.0
|
OD2
|
A:ASP439
|
2.8
|
140.2
|
1.0
|
OE1
|
A:GLU418
|
3.2
|
146.0
|
1.0
|
OE1
|
A:GLU421
|
3.5
|
160.3
|
1.0
|
NH2
|
A:ARG492
|
3.5
|
116.5
|
1.0
|
CG
|
A:ASN436
|
3.8
|
151.3
|
1.0
|
CD
|
A:GLU418
|
3.9
|
149.6
|
1.0
|
OE2
|
A:GLU418
|
4.0
|
148.1
|
1.0
|
CG
|
A:ASP439
|
4.0
|
133.5
|
1.0
|
CD
|
A:GLU421
|
4.3
|
167.4
|
1.0
|
OE2
|
A:GLU421
|
4.3
|
169.0
|
1.0
|
OD2
|
A:ASP433
|
4.5
|
159.2
|
1.0
|
ND2
|
A:ASN436
|
4.7
|
157.7
|
1.0
|
CA
|
A:ASN436
|
4.7
|
138.2
|
1.0
|
CB
|
A:ASP439
|
4.7
|
127.2
|
1.0
|
CB
|
A:ASN436
|
4.8
|
145.9
|
1.0
|
CZ
|
A:ARG492
|
4.8
|
113.4
|
1.0
|
OD1
|
A:ASP439
|
4.9
|
132.2
|
1.0
|
N
|
A:ASN436
|
5.0
|
139.5
|
1.0
|
|
Calcium binding site 2 out
of 4 in 7d4q
Go back to
Calcium Binding Sites List in 7d4q
Calcium binding site 2 out
of 4 in the Structure of Human TRPC5 in Complex with Hc-070
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca805
b:138.1
occ:1.00
|
OD1
|
B:ASN436
|
2.6
|
149.7
|
1.0
|
OD2
|
B:ASP439
|
2.8
|
140.2
|
1.0
|
OE1
|
B:GLU418
|
3.2
|
146.0
|
1.0
|
OE1
|
B:GLU421
|
3.5
|
160.3
|
1.0
|
NH2
|
B:ARG492
|
3.5
|
116.5
|
1.0
|
CG
|
B:ASN436
|
3.8
|
151.3
|
1.0
|
CD
|
B:GLU418
|
3.9
|
149.6
|
1.0
|
OE2
|
B:GLU418
|
4.0
|
148.1
|
1.0
|
CG
|
B:ASP439
|
4.0
|
133.5
|
1.0
|
CD
|
B:GLU421
|
4.3
|
167.4
|
1.0
|
OE2
|
B:GLU421
|
4.3
|
169.0
|
1.0
|
OD2
|
B:ASP433
|
4.5
|
159.2
|
1.0
|
ND2
|
B:ASN436
|
4.7
|
157.7
|
1.0
|
CA
|
B:ASN436
|
4.7
|
138.2
|
1.0
|
CB
|
B:ASP439
|
4.7
|
127.2
|
1.0
|
CB
|
B:ASN436
|
4.8
|
145.9
|
1.0
|
CZ
|
B:ARG492
|
4.8
|
113.4
|
1.0
|
OD1
|
B:ASP439
|
4.9
|
132.2
|
1.0
|
N
|
B:ASN436
|
5.0
|
139.5
|
1.0
|
|
Calcium binding site 3 out
of 4 in 7d4q
Go back to
Calcium Binding Sites List in 7d4q
Calcium binding site 3 out
of 4 in the Structure of Human TRPC5 in Complex with Hc-070
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca805
b:138.1
occ:1.00
|
OD1
|
C:ASN436
|
2.6
|
149.7
|
1.0
|
OD2
|
C:ASP439
|
2.8
|
140.2
|
1.0
|
OE1
|
C:GLU418
|
3.2
|
146.0
|
1.0
|
OE1
|
C:GLU421
|
3.5
|
160.3
|
1.0
|
NH2
|
C:ARG492
|
3.5
|
116.5
|
1.0
|
CG
|
C:ASN436
|
3.8
|
151.3
|
1.0
|
CD
|
C:GLU418
|
3.9
|
149.6
|
1.0
|
OE2
|
C:GLU418
|
4.0
|
148.1
|
1.0
|
CG
|
C:ASP439
|
4.0
|
133.5
|
1.0
|
CD
|
C:GLU421
|
4.3
|
167.4
|
1.0
|
OE2
|
C:GLU421
|
4.3
|
169.0
|
1.0
|
OD2
|
C:ASP433
|
4.5
|
159.2
|
1.0
|
ND2
|
C:ASN436
|
4.7
|
157.7
|
1.0
|
CA
|
C:ASN436
|
4.7
|
138.2
|
1.0
|
CB
|
C:ASP439
|
4.7
|
127.2
|
1.0
|
CB
|
C:ASN436
|
4.8
|
145.9
|
1.0
|
CZ
|
C:ARG492
|
4.8
|
113.4
|
1.0
|
OD1
|
C:ASP439
|
4.9
|
132.2
|
1.0
|
N
|
C:ASN436
|
5.0
|
139.5
|
1.0
|
|
Calcium binding site 4 out
of 4 in 7d4q
Go back to
Calcium Binding Sites List in 7d4q
Calcium binding site 4 out
of 4 in the Structure of Human TRPC5 in Complex with Hc-070
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Structure of Human TRPC5 in Complex with Hc-070 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca805
b:138.1
occ:1.00
|
OD1
|
D:ASN436
|
2.6
|
149.7
|
1.0
|
OD2
|
D:ASP439
|
2.8
|
140.2
|
1.0
|
OE1
|
D:GLU418
|
3.2
|
146.0
|
1.0
|
OE1
|
D:GLU421
|
3.5
|
160.3
|
1.0
|
NH2
|
D:ARG492
|
3.5
|
116.5
|
1.0
|
CG
|
D:ASN436
|
3.8
|
151.3
|
1.0
|
CD
|
D:GLU418
|
3.9
|
149.6
|
1.0
|
OE2
|
D:GLU418
|
4.0
|
148.1
|
1.0
|
CG
|
D:ASP439
|
4.0
|
133.5
|
1.0
|
CD
|
D:GLU421
|
4.3
|
167.4
|
1.0
|
OE2
|
D:GLU421
|
4.3
|
169.0
|
1.0
|
OD2
|
D:ASP433
|
4.5
|
159.2
|
1.0
|
ND2
|
D:ASN436
|
4.7
|
157.7
|
1.0
|
CA
|
D:ASN436
|
4.7
|
138.2
|
1.0
|
CB
|
D:ASP439
|
4.7
|
127.2
|
1.0
|
CB
|
D:ASN436
|
4.8
|
145.9
|
1.0
|
CZ
|
D:ARG492
|
4.8
|
113.4
|
1.0
|
OD1
|
D:ASP439
|
4.9
|
132.2
|
1.0
|
N
|
D:ASN436
|
5.0
|
139.5
|
1.0
|
|
Reference:
L.Chen,
K.Song,
M.Wei,
W.Guo.
Structure of Human TRPC5 in Complex with Hc-070 To Be Published.
Page generated: Thu Jul 18 23:55:33 2024
|