Calcium in PDB 7dpx: Crystal Structure of the Srcr Domain of Human SCARA1/CD204

The structure of Crystal Structure of the Srcr Domain of Human SCARA1/CD204, PDB code: 7dpx was solved by C.Cheng, Y.He, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.80 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	37.031, 57.086, 62.223, 90, 90, 90
R / Rfree (%)	20.8 / 25.2

The binding sites of Calcium atom in the Crystal Structure of the Srcr Domain of Human SCARA1/CD204 (pdb code 7dpx). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Srcr Domain of Human SCARA1/CD204, PDB code: 7dpx:

Calcium binding site 1 out of 1 in the Crystal Structure of the Srcr Domain of Human SCARA1/CD204


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Srcr Domain of Human SCARA1/CD204 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:28.2 occ:1.00 OE1 A:GLU96 2.3 29.8 1.0 O A:HOH383 2.3 35.7 1.0 OD1 A:ASP30 2.3 29.1 1.0 OD1 A:ASP29 2.3 25.9 1.0 O A:HOH382 2.5 33.0 1.0 O A:HOH320 2.7 35.5 1.0 CD A:GLU96 3.4 32.2 1.0 CG A:ASP29 3.4 29.3 1.0 CG A:ASP30 3.6 27.3 1.0 CG A:GLU96 3.8 30.1 1.0 OD2 A:ASP29 3.9 28.4 1.0 N A:ASP30 4.2 24.8 1.0 CB A:GLU96 4.2 26.5 1.0 CA A:ASP30 4.2 25.4 1.0 OD2 A:ASP30 4.4 26.2 1.0 C A:ASP29 4.4 25.5 1.0 OE2 A:GLU96 4.5 31.2 1.0 CB A:ASP30 4.5 28.4 1.0 O A:HOH398 4.6 51.4 1.0 SG A:CYS28 4.7 27.6 1.0 CB A:ASP29 4.7 24.6 1.0 O A:ASP29 4.8 25.5 1.0 O A:HOH331 4.9 51.2 1.0 O A:HOH405 4.9 45.6 1.0 CA A:ASP29 4.9 24.4 1.0 N A:ASP29 4.9 22.0 1.0 O A:HOH412 5.0 53.2 1.0

C.Cheng, E.Zheng, B.Yu, Z.Zhang, Y.Wang, Y.Liu, Y.He. Recognition of Lipoproteins By Scavenger Receptor Class A Members. J.Biol.Chem. 00948 2021.
ISSN: ESSN 1083-351X
PubMed: 34252459
DOI: 10.1016/J.JBC.2021.100948