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Calcium in PDB 7e1c: Structure of MREB3 From Spiroplasma Eriocheiris

Protein crystallography data

The structure of Structure of MREB3 From Spiroplasma Eriocheiris, PDB code: 7e1c was solved by D.Takahashi, M.Miyata, K.Imada, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.54 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.42, 68.09, 54.57, 90, 91.73, 90
R / Rfree (%) 18.5 / 22.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of MREB3 From Spiroplasma Eriocheiris (pdb code 7e1c). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of MREB3 From Spiroplasma Eriocheiris, PDB code: 7e1c:

Calcium binding site 1 out of 1 in 7e1c

Go back to Calcium Binding Sites List in 7e1c
Calcium binding site 1 out of 1 in the Structure of MREB3 From Spiroplasma Eriocheiris


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of MREB3 From Spiroplasma Eriocheiris within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:20.5
occ:1.00
O A:SER266 2.3 16.0 1.0
O A:HOH729 2.4 26.2 1.0
O A:HOH746 2.4 24.3 1.0
OXT A:ACT401 2.4 20.9 1.0
O A:HOH735 2.4 22.2 1.0
OG A:SER269 2.5 19.9 1.0
O A:ACT401 2.5 23.4 1.0
C A:ACT401 2.7 21.1 1.0
C A:SER266 3.5 16.5 1.0
CB A:SER269 3.5 18.0 1.0
CH3 A:ACT401 4.3 16.1 1.0
CA A:SER266 4.3 14.3 1.0
N A:ILE267 4.3 14.8 1.0
CA A:ILE267 4.4 17.1 1.0
O A:ILE267 4.4 16.6 1.0
CA A:SER269 4.6 19.4 1.0
C A:ILE267 4.6 16.9 1.0
N A:SER269 4.6 15.4 1.0
O A:HOH541 4.6 19.1 1.0
O A:HOH779 4.7 40.0 1.0
CB A:SER266 4.7 15.9 1.0
N A:SER270 4.8 13.7 1.0
O A:HOH825 4.9 41.2 1.0

Reference:

D.Takahashi, I.Fujiwara, A.Narita, K.Imada, M.Miyata. Structures and Dynamics of Mreb Proteins Involved in Swimming Motility of Spiroplasma Eriocheiris To Be Published.
Page generated: Tue Apr 4 18:03:09 2023

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