Calcium in PDB 7ehg: Crystal Structure of Mixbm
Protein crystallography data
The structure of Crystal Structure of Mixbm, PDB code: 7ehg
was solved by
Y.Fan,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
27.42 /
1.95
|
|
Space group
|
P 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
56.237,
66.145,
85.669,
84.15,
89.3,
89.23
|
|
R / Rfree (%)
|
17 /
20
|
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of Mixbm
(pdb code 7ehg). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 8 binding sites of Calcium where determined in the
Crystal Structure of Mixbm, PDB code: 7ehg:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Calcium binding site 1 out
of 8 in 7ehg
Go back to
Calcium Binding Sites List in 7ehg
Calcium binding site 1 out
of 8 in the Crystal Structure of Mixbm
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of Mixbm within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca302
b:15.9
occ:1.00
|
OD1
|
A:ASP129
|
2.2
|
13.2
|
1.0
|
|
O
|
A:GLN31
|
2.3
|
13.5
|
1.0
|
|
OE1
|
A:GLU10
|
2.3
|
13.9
|
1.0
|
|
O
|
A:SER28
|
2.4
|
12.9
|
1.0
|
|
OE1
|
A:GLU12
|
2.5
|
11.5
|
1.0
|
|
OE2
|
A:GLU12
|
2.5
|
13.1
|
1.0
|
|
O
|
A:ASP129
|
2.6
|
8.0
|
1.0
|
|
CD
|
A:GLU12
|
2.9
|
17.2
|
1.0
|
|
CG
|
A:ASP129
|
3.4
|
15.8
|
1.0
|
|
C
|
A:SER28
|
3.4
|
12.9
|
1.0
|
|
C
|
A:GLN31
|
3.4
|
13.6
|
1.0
|
|
C
|
A:ASP129
|
3.5
|
12.2
|
1.0
|
|
CD
|
A:GLU10
|
3.5
|
15.5
|
1.0
|
|
CA
|
A:ASP129
|
3.8
|
12.8
|
1.0
|
|
CB
|
A:SER28
|
4.1
|
13.5
|
1.0
|
|
CA
|
A:SER28
|
4.1
|
13.4
|
1.0
|
|
CB
|
A:GLU10
|
4.2
|
15.6
|
1.0
|
|
CB
|
A:ASP129
|
4.2
|
11.2
|
1.0
|
|
CA
|
A:TYR32
|
4.2
|
15.6
|
1.0
|
|
N
|
A:TYR32
|
4.2
|
12.8
|
1.0
|
|
N
|
A:SER28
|
4.3
|
15.4
|
1.0
|
|
CG
|
A:GLU10
|
4.3
|
15.1
|
1.0
|
|
OD2
|
A:ASP129
|
4.4
|
11.5
|
1.0
|
|
N
|
A:GLN31
|
4.4
|
11.1
|
1.0
|
|
OE2
|
A:GLU10
|
4.4
|
12.1
|
1.0
|
|
CG
|
A:GLU12
|
4.4
|
11.8
|
1.0
|
|
CA
|
A:GLN31
|
4.4
|
11.2
|
1.0
|
|
N
|
A:GLY29
|
4.5
|
14.2
|
1.0
|
|
CA
|
A:GLU10
|
4.6
|
13.4
|
1.0
|
|
N
|
A:ALA11
|
4.6
|
9.8
|
1.0
|
|
N
|
A:TYR130
|
4.6
|
10.3
|
1.0
|
|
CB
|
A:ALA27
|
4.6
|
13.4
|
1.0
|
|
CA
|
A:GLY29
|
4.7
|
15.9
|
1.0
|
|
OG
|
A:SER28
|
4.7
|
14.3
|
1.0
|
|
CB
|
A:TYR32
|
4.8
|
12.2
|
1.0
|
|
C
|
A:ALA27
|
4.8
|
17.2
|
1.0
|
|
CB
|
A:TYR130
|
4.9
|
11.1
|
1.0
|
|
CB
|
A:GLN31
|
4.9
|
13.3
|
1.0
|
|
O
|
A:HOH417
|
5.0
|
23.9
|
1.0
|
|
Calcium binding site 2 out
of 8 in 7ehg
Go back to
Calcium Binding Sites List in 7ehg
Calcium binding site 2 out
of 8 in the Crystal Structure of Mixbm
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of Mixbm within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca203
b:13.6
occ:1.00
|
OD1
|
B:ASP129
|
2.2
|
12.1
|
1.0
|
|
OE1
|
B:GLU10
|
2.3
|
12.8
|
1.0
|
|
O
|
B:GLN31
|
2.3
|
13.2
|
1.0
|
|
O
|
B:SER28
|
2.3
|
12.5
|
1.0
|
|
OE1
|
B:GLU12
|
2.5
|
11.4
|
1.0
|
|
OE2
|
B:GLU12
|
2.5
|
13.6
|
1.0
|
|
O
|
B:ASP129
|
2.6
|
8.3
|
1.0
|
|
CD
|
B:GLU12
|
2.9
|
18.1
|
1.0
|
|
C
|
B:SER28
|
3.4
|
13.3
|
1.0
|
|
C
|
B:GLN31
|
3.5
|
13.8
|
1.0
|
|
CG
|
B:ASP129
|
3.5
|
15.5
|
1.0
|
|
CD
|
B:GLU10
|
3.5
|
14.8
|
1.0
|
|
C
|
B:ASP129
|
3.5
|
12.4
|
1.0
|
|
CA
|
B:ASP129
|
3.8
|
11.8
|
1.0
|
|
CB
|
B:SER28
|
4.1
|
12.5
|
1.0
|
|
CB
|
B:GLU10
|
4.1
|
14.2
|
1.0
|
|
CA
|
B:SER28
|
4.1
|
13.1
|
1.0
|
|
CB
|
B:ASP129
|
4.3
|
10.1
|
1.0
|
|
CA
|
B:TYR32
|
4.3
|
15.6
|
1.0
|
|
CG
|
B:GLU10
|
4.3
|
15.4
|
1.0
|
|
N
|
B:SER28
|
4.3
|
15.6
|
1.0
|
|
N
|
B:TYR32
|
4.3
|
12.3
|
1.0
|
|
OE2
|
B:GLU10
|
4.4
|
14.1
|
1.0
|
|
N
|
B:GLN31
|
4.4
|
10.4
|
1.0
|
|
OD2
|
B:ASP129
|
4.4
|
10.1
|
1.0
|
|
CG
|
B:GLU12
|
4.4
|
12.6
|
1.0
|
|
N
|
B:GLY29
|
4.4
|
14.2
|
1.0
|
|
CA
|
B:GLN31
|
4.4
|
10.8
|
1.0
|
|
CA
|
B:GLU10
|
4.6
|
14.2
|
1.0
|
|
N
|
B:ALA11
|
4.6
|
8.8
|
1.0
|
|
N
|
B:TYR130
|
4.6
|
11.3
|
1.0
|
|
CA
|
B:GLY29
|
4.6
|
15.1
|
1.0
|
|
CB
|
B:ALA27
|
4.7
|
13.3
|
1.0
|
|
OG
|
B:SER28
|
4.7
|
13.8
|
1.0
|
|
CB
|
B:TYR32
|
4.8
|
12.5
|
1.0
|
|
C
|
B:ALA27
|
4.9
|
15.8
|
1.0
|
|
CB
|
B:TYR130
|
4.9
|
10.8
|
1.0
|
|
O
|
B:HOH312
|
4.9
|
23.9
|
1.0
|
|
CB
|
B:GLN31
|
4.9
|
13.7
|
1.0
|
|
C
|
B:GLU10
|
5.0
|
10.5
|
1.0
|
|
Calcium binding site 3 out
of 8 in 7ehg
Go back to
Calcium Binding Sites List in 7ehg
Calcium binding site 3 out
of 8 in the Crystal Structure of Mixbm
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of Mixbm within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca204
b:15.3
occ:1.00
|
OD1
|
C:ASP129
|
2.3
|
15.6
|
1.0
|
|
OE1
|
C:GLU10
|
2.3
|
13.8
|
1.0
|
|
O
|
C:GLN31
|
2.3
|
15.2
|
1.0
|
|
O
|
C:SER28
|
2.4
|
11.2
|
1.0
|
|
OE2
|
C:GLU12
|
2.5
|
14.4
|
1.0
|
|
OE1
|
C:GLU12
|
2.5
|
12.2
|
1.0
|
|
O
|
C:ASP129
|
2.5
|
13.1
|
1.0
|
|
CD
|
C:GLU12
|
2.8
|
18.3
|
1.0
|
|
CD
|
C:GLU10
|
3.4
|
14.9
|
1.0
|
|
C
|
C:ASP129
|
3.5
|
13.0
|
1.0
|
|
C
|
C:SER28
|
3.5
|
13.5
|
1.0
|
|
C
|
C:GLN31
|
3.5
|
13.7
|
1.0
|
|
CG
|
C:ASP129
|
3.5
|
15.9
|
1.0
|
|
CA
|
C:ASP129
|
3.9
|
15.5
|
1.0
|
|
CB
|
C:GLU10
|
4.0
|
14.7
|
1.0
|
|
CB
|
C:SER28
|
4.1
|
12.2
|
1.0
|
|
CG
|
C:GLU10
|
4.2
|
11.8
|
1.0
|
|
CA
|
C:SER28
|
4.2
|
14.4
|
1.0
|
|
CA
|
C:TYR32
|
4.3
|
14.0
|
1.0
|
|
CB
|
C:ASP129
|
4.3
|
12.4
|
1.0
|
|
N
|
C:TYR32
|
4.3
|
14.5
|
1.0
|
|
N
|
C:SER28
|
4.3
|
16.1
|
1.0
|
|
OE2
|
C:GLU10
|
4.3
|
13.6
|
1.0
|
|
CG
|
C:GLU12
|
4.4
|
16.1
|
1.0
|
|
N
|
C:GLN31
|
4.4
|
14.6
|
1.0
|
|
OD2
|
C:ASP129
|
4.4
|
11.3
|
1.0
|
|
CA
|
C:GLU10
|
4.5
|
13.3
|
1.0
|
|
N
|
C:ALA11
|
4.5
|
12.8
|
1.0
|
|
N
|
C:GLY29
|
4.5
|
15.2
|
1.0
|
|
CA
|
C:GLN31
|
4.5
|
14.7
|
1.0
|
|
N
|
C:TYR130
|
4.6
|
11.9
|
1.0
|
|
CA
|
C:GLY29
|
4.7
|
17.0
|
1.0
|
|
OG
|
C:SER28
|
4.7
|
17.3
|
1.0
|
|
CB
|
C:ALA27
|
4.7
|
12.8
|
1.0
|
|
CB
|
C:TYR130
|
4.8
|
12.5
|
1.0
|
|
O
|
C:HOH304
|
4.8
|
25.3
|
1.0
|
|
CB
|
C:TYR32
|
4.9
|
11.4
|
1.0
|
|
C
|
C:GLU10
|
4.9
|
16.0
|
1.0
|
|
C
|
C:ALA27
|
4.9
|
14.4
|
1.0
|
|
CB
|
C:GLN31
|
4.9
|
14.7
|
1.0
|
|
CA
|
C:TYR130
|
5.0
|
13.7
|
1.0
|
|
Calcium binding site 4 out
of 8 in 7ehg
Go back to
Calcium Binding Sites List in 7ehg
Calcium binding site 4 out
of 8 in the Crystal Structure of Mixbm
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of Mixbm within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca202
b:15.3
occ:1.00
|
OD1
|
D:ASP129
|
2.3
|
15.3
|
1.0
|
|
OE1
|
D:GLU10
|
2.3
|
13.1
|
1.0
|
|
O
|
D:GLN31
|
2.3
|
13.2
|
1.0
|
|
O
|
D:SER28
|
2.4
|
11.5
|
1.0
|
|
OE2
|
D:GLU12
|
2.5
|
14.1
|
1.0
|
|
OE1
|
D:GLU12
|
2.5
|
12.3
|
1.0
|
|
O
|
D:ASP129
|
2.6
|
13.1
|
1.0
|
|
CD
|
D:GLU12
|
2.8
|
18.9
|
1.0
|
|
CD
|
D:GLU10
|
3.4
|
15.2
|
1.0
|
|
C
|
D:ASP129
|
3.5
|
12.9
|
1.0
|
|
C
|
D:SER28
|
3.5
|
13.9
|
1.0
|
|
C
|
D:GLN31
|
3.5
|
13.1
|
1.0
|
|
CG
|
D:ASP129
|
3.5
|
15.7
|
1.0
|
|
CA
|
D:ASP129
|
3.9
|
14.8
|
1.0
|
|
CB
|
D:GLU10
|
4.0
|
14.5
|
1.0
|
|
CB
|
D:SER28
|
4.1
|
11.7
|
1.0
|
|
CA
|
D:SER28
|
4.2
|
14.6
|
1.0
|
|
CG
|
D:GLU10
|
4.2
|
11.9
|
1.0
|
|
CA
|
D:TYR32
|
4.3
|
12.7
|
1.0
|
|
CB
|
D:ASP129
|
4.3
|
12.7
|
1.0
|
|
N
|
D:TYR32
|
4.3
|
15.5
|
1.0
|
|
N
|
D:SER28
|
4.3
|
15.6
|
1.0
|
|
OE2
|
D:GLU10
|
4.3
|
12.5
|
1.0
|
|
CG
|
D:GLU12
|
4.4
|
15.8
|
1.0
|
|
N
|
D:GLN31
|
4.4
|
14.8
|
1.0
|
|
OD2
|
D:ASP129
|
4.4
|
12.5
|
1.0
|
|
CA
|
D:GLU10
|
4.5
|
13.5
|
1.0
|
|
CA
|
D:GLN31
|
4.5
|
15.0
|
1.0
|
|
N
|
D:ALA11
|
4.5
|
13.5
|
1.0
|
|
N
|
D:GLY29
|
4.5
|
14.8
|
1.0
|
|
N
|
D:TYR130
|
4.6
|
12.1
|
1.0
|
|
OG
|
D:SER28
|
4.7
|
17.7
|
1.0
|
|
CA
|
D:GLY29
|
4.7
|
16.8
|
1.0
|
|
CB
|
D:ALA27
|
4.7
|
12.4
|
1.0
|
|
CB
|
D:TYR130
|
4.8
|
12.2
|
1.0
|
|
O
|
D:HOH310
|
4.8
|
26.4
|
1.0
|
|
CB
|
D:TYR32
|
4.9
|
11.9
|
1.0
|
|
C
|
D:GLU10
|
4.9
|
16.7
|
1.0
|
|
C
|
D:ALA27
|
4.9
|
15.4
|
1.0
|
|
CB
|
D:GLN31
|
4.9
|
14.9
|
1.0
|
|
Calcium binding site 5 out
of 8 in 7ehg
Go back to
Calcium Binding Sites List in 7ehg
Calcium binding site 5 out
of 8 in the Crystal Structure of Mixbm
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Crystal Structure of Mixbm within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Ca201
b:13.8
occ:1.00
|
OD1
|
E:ASP129
|
2.3
|
12.0
|
1.0
|
|
OE1
|
E:GLU10
|
2.3
|
13.1
|
1.0
|
|
O
|
E:GLN31
|
2.3
|
13.7
|
1.0
|
|
O
|
E:SER28
|
2.4
|
14.5
|
1.0
|
|
OE2
|
E:GLU12
|
2.4
|
18.8
|
1.0
|
|
OE1
|
E:GLU12
|
2.5
|
13.8
|
1.0
|
|
O
|
E:ASP129
|
2.6
|
11.2
|
1.0
|
|
CD
|
E:GLU12
|
2.8
|
16.7
|
1.0
|
|
CD
|
E:GLU10
|
3.4
|
13.6
|
1.0
|
|
C
|
E:ASP129
|
3.4
|
14.6
|
1.0
|
|
C
|
E:SER28
|
3.5
|
17.7
|
1.0
|
|
CG
|
E:ASP129
|
3.5
|
12.8
|
1.0
|
|
C
|
E:GLN31
|
3.5
|
15.7
|
1.0
|
|
CA
|
E:ASP129
|
3.9
|
11.4
|
1.0
|
|
CB
|
E:SER28
|
4.1
|
15.2
|
1.0
|
|
CB
|
E:GLU10
|
4.1
|
17.0
|
1.0
|
|
CA
|
E:SER28
|
4.1
|
13.5
|
1.0
|
|
N
|
E:SER28
|
4.2
|
13.4
|
1.0
|
|
CG
|
E:GLU10
|
4.3
|
14.8
|
1.0
|
|
CB
|
E:ASP129
|
4.3
|
9.9
|
1.0
|
|
CA
|
E:TYR32
|
4.3
|
12.9
|
1.0
|
|
OE2
|
E:GLU10
|
4.3
|
16.8
|
1.0
|
|
N
|
E:TYR32
|
4.3
|
14.4
|
1.0
|
|
CG
|
E:GLU12
|
4.4
|
16.5
|
1.0
|
|
OD2
|
E:ASP129
|
4.4
|
11.1
|
1.0
|
|
N
|
E:GLN31
|
4.4
|
14.3
|
1.0
|
|
CA
|
E:GLN31
|
4.5
|
15.7
|
1.0
|
|
CA
|
E:GLU10
|
4.5
|
14.0
|
1.0
|
|
N
|
E:GLY29
|
4.5
|
12.9
|
1.0
|
|
N
|
E:ALA11
|
4.5
|
14.1
|
1.0
|
|
N
|
E:TYR130
|
4.6
|
12.4
|
1.0
|
|
CB
|
E:ALA27
|
4.7
|
11.3
|
1.0
|
|
OG
|
E:SER28
|
4.7
|
16.2
|
1.0
|
|
CA
|
E:GLY29
|
4.8
|
11.2
|
1.0
|
|
CB
|
E:TYR130
|
4.8
|
11.4
|
1.0
|
|
O
|
E:HOH316
|
4.8
|
24.0
|
1.0
|
|
C
|
E:ALA27
|
4.9
|
14.8
|
1.0
|
|
CB
|
E:TYR32
|
4.9
|
12.6
|
1.0
|
|
CB
|
E:GLN31
|
4.9
|
14.0
|
1.0
|
|
C
|
E:GLU10
|
5.0
|
13.7
|
1.0
|
|
Calcium binding site 6 out
of 8 in 7ehg
Go back to
Calcium Binding Sites List in 7ehg
Calcium binding site 6 out
of 8 in the Crystal Structure of Mixbm
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Crystal Structure of Mixbm within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Ca201
b:14.4
occ:1.00
|
OD1
|
F:ASP129
|
2.3
|
11.7
|
1.0
|
|
OE1
|
F:GLU10
|
2.3
|
13.3
|
1.0
|
|
O
|
F:GLN31
|
2.4
|
13.1
|
1.0
|
|
O
|
F:SER28
|
2.4
|
15.5
|
1.0
|
|
OE2
|
F:GLU12
|
2.4
|
17.6
|
1.0
|
|
OE1
|
F:GLU12
|
2.5
|
14.1
|
1.0
|
|
O
|
F:ASP129
|
2.6
|
12.0
|
1.0
|
|
CD
|
F:GLU12
|
2.8
|
17.0
|
1.0
|
|
CD
|
F:GLU10
|
3.4
|
13.6
|
1.0
|
|
C
|
F:ASP129
|
3.5
|
15.8
|
1.0
|
|
C
|
F:SER28
|
3.5
|
17.4
|
1.0
|
|
CG
|
F:ASP129
|
3.5
|
13.2
|
1.0
|
|
C
|
F:GLN31
|
3.5
|
15.6
|
1.0
|
|
CA
|
F:ASP129
|
3.9
|
11.7
|
1.0
|
|
CB
|
F:SER28
|
4.0
|
14.5
|
1.0
|
|
CB
|
F:GLU10
|
4.1
|
17.4
|
1.0
|
|
CA
|
F:SER28
|
4.1
|
12.3
|
1.0
|
|
N
|
F:SER28
|
4.2
|
12.5
|
1.0
|
|
CG
|
F:GLU10
|
4.3
|
13.5
|
1.0
|
|
CB
|
F:ASP129
|
4.3
|
10.5
|
1.0
|
|
OE2
|
F:GLU10
|
4.3
|
17.2
|
1.0
|
|
CA
|
F:TYR32
|
4.3
|
13.3
|
1.0
|
|
N
|
F:TYR32
|
4.3
|
13.7
|
1.0
|
|
CG
|
F:GLU12
|
4.4
|
17.5
|
1.0
|
|
OD2
|
F:ASP129
|
4.4
|
12.2
|
1.0
|
|
N
|
F:GLN31
|
4.5
|
14.5
|
1.0
|
|
CA
|
F:GLU10
|
4.5
|
15.0
|
1.0
|
|
CA
|
F:GLN31
|
4.5
|
16.4
|
1.0
|
|
N
|
F:GLY29
|
4.5
|
12.9
|
1.0
|
|
N
|
F:ALA11
|
4.5
|
15.2
|
1.0
|
|
N
|
F:TYR130
|
4.6
|
12.0
|
1.0
|
|
OG
|
F:SER28
|
4.7
|
17.0
|
1.0
|
|
CB
|
F:ALA27
|
4.7
|
11.1
|
1.0
|
|
CB
|
F:TYR130
|
4.8
|
11.4
|
1.0
|
|
CA
|
F:GLY29
|
4.8
|
10.3
|
1.0
|
|
O
|
F:HOH315
|
4.8
|
24.9
|
1.0
|
|
C
|
F:ALA27
|
4.9
|
14.9
|
1.0
|
|
CB
|
F:TYR32
|
4.9
|
12.4
|
1.0
|
|
CB
|
F:GLN31
|
4.9
|
13.9
|
1.0
|
|
C
|
F:GLU10
|
5.0
|
13.7
|
1.0
|
|
Calcium binding site 7 out
of 8 in 7ehg
Go back to
Calcium Binding Sites List in 7ehg
Calcium binding site 7 out
of 8 in the Crystal Structure of Mixbm
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Crystal Structure of Mixbm within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Ca302
b:16.8
occ:1.00
|
OD1
|
G:ASP129
|
2.3
|
11.9
|
1.0
|
|
OE1
|
G:GLU10
|
2.3
|
14.7
|
1.0
|
|
O
|
G:GLN31
|
2.3
|
12.1
|
1.0
|
|
O
|
G:SER28
|
2.4
|
9.8
|
1.0
|
|
OE1
|
G:GLU12
|
2.5
|
13.9
|
1.0
|
|
OE2
|
G:GLU12
|
2.5
|
13.7
|
1.0
|
|
O
|
G:ASP129
|
2.6
|
9.4
|
1.0
|
|
CD
|
G:GLU12
|
2.9
|
13.8
|
1.0
|
|
CD
|
G:GLU10
|
3.4
|
11.9
|
1.0
|
|
C
|
G:ASP129
|
3.5
|
13.9
|
1.0
|
|
C
|
G:GLN31
|
3.5
|
14.0
|
1.0
|
|
CG
|
G:ASP129
|
3.5
|
13.9
|
1.0
|
|
C
|
G:SER28
|
3.5
|
14.3
|
1.0
|
|
CA
|
G:ASP129
|
3.8
|
9.9
|
1.0
|
|
CB
|
G:SER28
|
4.1
|
10.6
|
1.0
|
|
CB
|
G:GLU10
|
4.1
|
16.0
|
1.0
|
|
CA
|
G:SER28
|
4.2
|
12.5
|
1.0
|
|
N
|
G:SER28
|
4.2
|
12.3
|
1.0
|
|
OE2
|
G:GLU10
|
4.2
|
13.6
|
1.0
|
|
CG
|
G:GLU10
|
4.3
|
14.5
|
1.0
|
|
CB
|
G:ASP129
|
4.3
|
12.3
|
1.0
|
|
N
|
G:TYR32
|
4.3
|
11.9
|
1.0
|
|
CA
|
G:TYR32
|
4.3
|
14.5
|
1.0
|
|
N
|
G:GLN31
|
4.4
|
10.7
|
1.0
|
|
CG
|
G:GLU12
|
4.4
|
12.2
|
1.0
|
|
OD2
|
G:ASP129
|
4.4
|
13.1
|
1.0
|
|
CA
|
G:GLN31
|
4.5
|
13.3
|
1.0
|
|
N
|
G:ALA11
|
4.5
|
11.8
|
1.0
|
|
CA
|
G:GLU10
|
4.5
|
11.4
|
1.0
|
|
N
|
G:GLY29
|
4.5
|
14.5
|
1.0
|
|
N
|
G:TYR130
|
4.6
|
10.5
|
1.0
|
|
OG
|
G:SER28
|
4.7
|
11.8
|
1.0
|
|
CB
|
G:ALA27
|
4.7
|
13.8
|
1.0
|
|
CA
|
G:GLY29
|
4.8
|
12.4
|
1.0
|
|
CB
|
G:TYR130
|
4.8
|
12.5
|
1.0
|
|
C
|
G:ALA27
|
4.9
|
15.1
|
1.0
|
|
CB
|
G:TYR32
|
4.9
|
10.6
|
1.0
|
|
O
|
G:HOH413
|
4.9
|
25.4
|
1.0
|
|
C
|
G:GLU10
|
5.0
|
11.6
|
1.0
|
|
CB
|
G:GLN31
|
5.0
|
12.4
|
1.0
|
|
Calcium binding site 8 out
of 8 in 7ehg
Go back to
Calcium Binding Sites List in 7ehg
Calcium binding site 8 out
of 8 in the Crystal Structure of Mixbm
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Crystal Structure of Mixbm within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Ca202
b:13.6
occ:1.00
|
OD1
|
H:ASP129
|
2.2
|
12.3
|
1.0
|
|
OE1
|
H:GLU10
|
2.3
|
13.8
|
1.0
|
|
O
|
H:GLN31
|
2.3
|
13.8
|
1.0
|
|
O
|
H:SER28
|
2.4
|
11.3
|
1.0
|
|
OE1
|
H:GLU12
|
2.5
|
12.9
|
1.0
|
|
OE2
|
H:GLU12
|
2.5
|
12.3
|
1.0
|
|
O
|
H:ASP129
|
2.6
|
10.3
|
1.0
|
|
CD
|
H:GLU12
|
2.9
|
13.5
|
1.0
|
|
CD
|
H:GLU10
|
3.4
|
12.4
|
1.0
|
|
CG
|
H:ASP129
|
3.5
|
14.1
|
1.0
|
|
C
|
H:ASP129
|
3.5
|
13.4
|
1.0
|
|
C
|
H:SER28
|
3.5
|
13.9
|
1.0
|
|
C
|
H:GLN31
|
3.5
|
14.4
|
1.0
|
|
CA
|
H:ASP129
|
3.9
|
9.6
|
1.0
|
|
CB
|
H:SER28
|
4.1
|
10.9
|
1.0
|
|
CA
|
H:SER28
|
4.1
|
13.1
|
1.0
|
|
CB
|
H:GLU10
|
4.1
|
15.9
|
1.0
|
|
N
|
H:SER28
|
4.2
|
11.9
|
1.0
|
|
OE2
|
H:GLU10
|
4.2
|
12.7
|
1.0
|
|
CB
|
H:ASP129
|
4.3
|
13.0
|
1.0
|
|
CG
|
H:GLU10
|
4.3
|
14.6
|
1.0
|
|
CA
|
H:TYR32
|
4.3
|
14.8
|
1.0
|
|
N
|
H:TYR32
|
4.3
|
10.8
|
1.0
|
|
N
|
H:GLN31
|
4.4
|
9.7
|
1.0
|
|
OD2
|
H:ASP129
|
4.4
|
13.2
|
1.0
|
|
CG
|
H:GLU12
|
4.4
|
11.9
|
1.0
|
|
CA
|
H:GLN31
|
4.5
|
12.9
|
1.0
|
|
N
|
H:ALA11
|
4.5
|
11.6
|
1.0
|
|
N
|
H:GLY29
|
4.5
|
13.6
|
1.0
|
|
CA
|
H:GLU10
|
4.5
|
10.5
|
1.0
|
|
N
|
H:TYR130
|
4.6
|
11.6
|
1.0
|
|
OG
|
H:SER28
|
4.6
|
13.7
|
1.0
|
|
CB
|
H:ALA27
|
4.7
|
13.4
|
1.0
|
|
CA
|
H:GLY29
|
4.7
|
12.5
|
1.0
|
|
C
|
H:ALA27
|
4.8
|
14.5
|
1.0
|
|
CB
|
H:TYR130
|
4.8
|
12.8
|
1.0
|
|
CB
|
H:TYR32
|
4.9
|
11.9
|
1.0
|
|
CB
|
H:GLN31
|
5.0
|
13.3
|
1.0
|
|
O
|
H:HOH322
|
5.0
|
26.1
|
1.0
|
|
C
|
H:GLU10
|
5.0
|
11.2
|
1.0
|
|
Reference:
Y.Fan,
Y.Fan.
N/A N/A.
Page generated: Fri Jul 19 00:25:45 2024
|
