Calcium in PDB 7ehi: Crystal Structure of Covalent Maltosyl-Alpha-Glucosidase Intermediate

All present enzymatic activity of Crystal Structure of Covalent Maltosyl-Alpha-Glucosidase Intermediate:
3.2.1.20;

The structure of Crystal Structure of Covalent Maltosyl-Alpha-Glucosidase Intermediate, PDB code: 7ehi was solved by K.Krusong, K.Wangpaiboon, S.Kim, T.Mori, T.Hakoshima, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.86 / 1.69
Space group	P 41 2 2
Cell size a, b, c (Å), α, β, γ (°)	116.566, 116.566, 107.181, 90, 90, 90
R / Rfree (%)	15.1 / 17.7

The binding sites of Calcium atom in the Crystal Structure of Covalent Maltosyl-Alpha-Glucosidase Intermediate (pdb code 7ehi). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Covalent Maltosyl-Alpha-Glucosidase Intermediate, PDB code: 7ehi:

Calcium binding site 1 out of 1 in the Crystal Structure of Covalent Maltosyl-Alpha-Glucosidase Intermediate


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Covalent Maltosyl-Alpha-Glucosidase Intermediate within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca605 b:10.8 occ:1.00 OD1 A:ASN160 2.3 13.5 1.0 OD1 A:ASP161 2.3 12.8 1.0 OD2 A:ASP183 2.4 11.4 1.0 O A:ASP157 2.4 12.2 1.0 OD1 A:ASN155 2.4 9.8 1.0 O A:GLY181 2.5 9.9 1.0 O A:HOH818 2.5 11.5 1.0 CG A:ASN155 3.3 9.9 1.0 CG A:ASP183 3.4 11.4 1.0 C A:ASP157 3.4 13.0 1.0 CG A:ASN160 3.4 8.1 1.0 C A:GLY181 3.5 10.6 1.0 CG A:ASP161 3.6 15.6 1.0 ND2 A:ASN155 3.9 11.8 1.0 CA A:GLY181 3.9 10.2 1.0 CB A:ASP183 4.0 11.1 1.0 ND2 A:ASN160 4.0 13.9 1.0 N A:ASP157 4.1 11.9 1.0 N A:ASP161 4.1 11.7 1.0 CA A:ASP157 4.2 12.1 1.0 CA A:ASP161 4.3 11.6 1.0 N A:VAL158 4.3 12.4 1.0 OD2 A:ASP161 4.4 12.6 1.0 C A:ASN160 4.4 13.3 1.0 OD1 A:ASP183 4.4 11.0 1.0 O A:HIS227 4.4 13.3 1.0 CA A:VAL158 4.4 12.8 1.0 CB A:ASN155 4.5 9.0 1.0 CB A:ASP157 4.5 11.8 1.0 CB A:ASP161 4.5 13.2 1.0 CA A:ASN155 4.6 10.9 1.0 N A:ASN160 4.7 13.5 1.0 C A:GLY182 4.7 8.6 1.0 CB A:ASN160 4.7 11.3 1.0 N A:GLY182 4.7 9.3 1.0 O A:GLY182 4.7 10.7 1.0 C A:VAL158 4.7 12.8 1.0 O A:ASN160 4.7 13.6 1.0 CA A:ASN160 4.8 12.3 1.0 N A:GLY156 4.9 10.5 1.0 N A:ASP183 5.0 10.0 1.0 O A:HOH880 5.0 13.6 1.0 O A:VAL158 5.0 15.5 1.0

K.Wangpaiboon, P.Laohawutthichai, S.Kim, T.Mori, P.Nakapong, R.Pichayangkura, P.Pongsawasdi, T.Hakoshima, K.Krusong. A GH13 Alpha-Glucosidase From Weissella Cibaria Uncommonly Acts on Short-Chain Maltooligosaccharides. Acta Crystallogr.,Sect.D V. 77 1064 2021.
ISSN: ESSN 1399-0047
DOI: 10.1107/S205979832100677X