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Calcium in PDB 7f55: Cryo-Em Structure of Bremelanotide-MC4R-GS_NB35 Complex

Calcium Binding Sites:

The binding sites of Calcium atom in the Cryo-Em Structure of Bremelanotide-MC4R-GS_NB35 Complex (pdb code 7f55). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Bremelanotide-MC4R-GS_NB35 Complex, PDB code: 7f55:

Calcium binding site 1 out of 1 in 7f55

Go back to Calcium Binding Sites List in 7f55
Calcium binding site 1 out of 1 in the Cryo-Em Structure of Bremelanotide-MC4R-GS_NB35 Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Bremelanotide-MC4R-GS_NB35 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Ca601

b:115.5
occ:1.00
OE2 R:GLU100 2.3 112.0 1.0
OD1 R:ASP126 2.3 99.8 1.0
O L:DPN4 2.4 100.1 1.0
OD2 R:ASP122 2.7 113.5 1.0
OD2 R:ASP126 2.7 99.8 1.0
O L:NLE1 2.8 111.8 1.0
CG R:ASP126 2.9 99.8 1.0
CD R:GLU100 3.3 112.0 1.0
C L:DPN4 3.4 100.1 1.0
OE1 R:GLU100 3.6 112.0 1.0
CG R:ASP122 3.7 113.5 1.0
N L:DPN4 3.7 100.1 1.0
CA L:DPN4 3.9 100.1 1.0
CB L:DPN4 4.0 100.1 1.0
OD1 R:ASP122 4.0 113.5 1.0
C L:NLE1 4.0 111.8 1.0
CB R:ASP126 4.4 99.8 1.0
C L:HIS3 4.4 109.9 1.0
N L:NLE1 4.5 111.8 1.0
CG L:ARG5 4.5 103.4 1.0
O R:ASP122 4.5 113.5 1.0
N L:ARG5 4.6 103.4 1.0
CG R:GLU100 4.6 112.0 1.0
N L:HIS3 4.6 109.9 1.0
C L:ASP2 4.7 111.0 1.0
CA L:HIS3 4.8 109.9 1.0
CA L:NLE1 4.8 111.8 1.0
N L:ASP2 5.0 111.0 1.0
CB R:ASP122 5.0 113.5 1.0
O L:ASP2 5.0 111.0 1.0

Reference:

H.Zhang, L.N.Chen, D.Yang, C.Mao, Q.Shen, W.Feng, D.D.Shen, A.Dai, S.Xie, Y.Zhou, J.Qin, J.P.Sun, D.H.Scharf, T.Hou, T.Zhou, M.W.Wang, Y.Zhang. Structural Insights Into Ligand Recognition and Activation of the Melanocortin-4 Receptor. Cell Res. 2021.
ISSN: ISSN 1001-0602
PubMed: 34433901
DOI: 10.1038/S41422-021-00552-3
Page generated: Wed Jul 9 21:59:48 2025

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