Calcium in PDB 7fgc: A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus

The structure of A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus, PDB code: 7fgc was solved by Y.Chai, Y.Wu, F.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	18.76 / 1.90
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	120.232, 143.029, 120.082, 90, 90, 90
R / Rfree (%)	21.2 / 24.6

The binding sites of Calcium atom in the A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus (pdb code 7fgc). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus, PDB code: 7fgc:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca502 b:32.3 occ:1.00 O A:ASP293 2.3 20.9 1.0 O A:GLY344 2.4 20.2 1.0 O A:ASN297 2.4 24.0 1.0 O A:HOH726 2.5 24.4 1.0 OD2 A:ASP324 2.5 24.3 1.0 O A:THR295 2.8 24.2 1.0 C A:GLY344 3.5 23.2 1.0 C A:ASP293 3.6 20.5 1.0 C A:ASN297 3.6 28.1 1.0 CG A:ASP324 3.6 22.2 1.0 CA A:GLY345 3.9 21.4 1.0 O A:HOH741 3.9 22.0 1.0 C A:THR295 4.0 25.2 1.0 C A:ASN294 4.1 22.6 1.0 CA A:ASN294 4.1 22.6 1.0 N A:GLY345 4.2 20.8 1.0 N A:THR295 4.3 23.0 1.0 N A:ASN297 4.3 27.0 1.0 N A:ASN294 4.3 21.9 1.0 CB A:ASP324 4.4 21.0 1.0 N A:GLY344 4.5 22.9 1.0 N A:SER298 4.5 23.2 1.0 OD1 A:ASP324 4.5 22.3 1.0 CA A:ASN297 4.5 25.0 1.0 C A:ALA296 4.5 27.6 1.0 O A:ASN294 4.5 21.7 1.0 CA A:SER298 4.6 24.6 1.0 O A:LEU342 4.6 25.4 1.0 CA A:GLY344 4.6 23.2 1.0 CA A:ASP293 4.6 21.2 1.0 O A:ALA296 4.7 31.3 1.0 CA A:THR295 4.8 26.2 1.0 CB A:ASP293 4.8 21.0 1.0 N A:ASP293 4.8 19.9 1.0 N A:ALA296 5.0 27.4 1.0 O A:PRO326 5.0 22.7 1.0

Calcium binding site 2 out of 2 in the A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca502 b:31.1 occ:1.00 O B:ASP293 2.4 18.2 1.0 O B:GLY344 2.4 19.2 1.0 O B:ASN297 2.4 20.8 1.0 O B:HOH674 2.5 22.1 1.0 OD2 B:ASP324 2.5 21.8 1.0 O B:THR295 2.7 19.7 1.0 C B:GLY344 3.6 19.7 1.0 C B:ASN297 3.6 24.6 1.0 C B:ASP293 3.6 20.1 1.0 CG B:ASP324 3.7 22.1 1.0 C B:THR295 3.9 22.8 1.0 CA B:GLY345 4.0 19.3 1.0 O B:HOH766 4.1 21.3 1.0 C B:ASN294 4.1 21.6 1.0 CA B:ASN294 4.2 21.1 1.0 N B:GLY345 4.2 20.0 1.0 N B:THR295 4.2 19.8 1.0 N B:ASN297 4.3 22.4 1.0 N B:ASN294 4.4 19.5 1.0 C B:ALA296 4.4 23.4 1.0 CB B:ASP324 4.5 19.3 1.0 N B:GLY344 4.5 21.5 1.0 CA B:ASN297 4.5 23.3 1.0 N B:SER298 4.5 21.1 1.0 OD1 B:ASP324 4.5 18.9 1.0 O B:LEU342 4.5 23.0 1.0 O B:ASN294 4.5 17.5 1.0 CA B:SER298 4.6 22.0 1.0 CA B:GLY344 4.6 21.2 1.0 CA B:ASP293 4.7 21.1 1.0 O B:ALA296 4.7 26.2 1.0 CA B:THR295 4.8 21.9 1.0 N B:ASP293 4.8 19.5 1.0 N B:ALA296 4.8 22.0 1.0 CB B:ASP293 4.8 17.8 1.0 CA B:ALA296 4.9 23.0 1.0 O B:PRO326 4.9 21.2 1.0 OG B:SER298 4.9 28.7 1.0

Y.Chai, Y.Wu, F.Gao. A Naturally-Occurring Neuraminidase-Inhibitors-Resistant Na From Asiatic Toad Influenza B-Like Virus To Be Published.