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Calcium in PDB 7kt3: Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN)
Enzymatic activity of Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN)
All present enzymatic activity of Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN):
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN), PDB code: 7kt3
was solved by
J.A.Jamsen,
S.H.Wilson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 24.54 / 1.88 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 59.804, 68.579, 110.149, 90, 90, 90 |
| R / Rfree (%) | 16 / 18.8 |
Other elements in 7kt3:
The structure of Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN) also contains other interesting chemical elements:
| Sodium | (Na) | 1 atom |
| Chlorine | (Cl) | 3 atoms |
Calcium Binding Sites:
The binding sites of Calcium atom in the Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN)
(pdb code 7kt3). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN), PDB code: 7kt3:
Jump to Calcium binding site number: 1; 2; 3;
In total 3 binding sites of Calcium where determined in the Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN), PDB code: 7kt3:
Jump to Calcium binding site number: 1; 2; 3;
Calcium binding site 1 out of 3 in 7kt3
Go back to
Calcium Binding Sites List in 7kt3
Calcium binding site 1 out
of 3 in the Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN) within 5.0Å range:
|
Calcium binding site 2 out of 3 in 7kt3
Go back to
Calcium Binding Sites List in 7kt3
Calcium binding site 2 out
of 3 in the Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN) within 5.0Å range:
|
Calcium binding site 3 out of 3 in 7kt3
Go back to
Calcium Binding Sites List in 7kt3
Calcium binding site 3 out
of 3 in the Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN)
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN) within 5.0Å range:
|
Reference:
J.A.Jamsen,
A.Sassa,
D.D.Shock,
W.A.Beard,
S.H.Wilson.
Dna Polymerase Mu, 8-Oxodgtp:at Pre-Catalytic Ground State Ternary Complex, 20 Mm CA2+ (120MIN) To Be Published.
Page generated: Fri Jul 19 01:24:17 2024
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