Calcium in PDB 7l65: C-Type Carbohydrate-Recognition Domain 4 of the Mannose Receptor Complexed with Methyl-Glcnac

The structure of C-Type Carbohydrate-Recognition Domain 4 of the Mannose Receptor Complexed with Methyl-Glcnac, PDB code: 7l65 was solved by W.I.Weis, H.Feinberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.40 / 1.35
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	32.81, 56.326, 34.33, 90, 112.08, 90
R / Rfree (%)	13.5 / 17

The binding sites of Calcium atom in the C-Type Carbohydrate-Recognition Domain 4 of the Mannose Receptor Complexed with Methyl-Glcnac (pdb code 7l65). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the C-Type Carbohydrate-Recognition Domain 4 of the Mannose Receptor Complexed with Methyl-Glcnac, PDB code: 7l65:

Calcium binding site 1 out of 1 in the C-Type Carbohydrate-Recognition Domain 4 of the Mannose Receptor Complexed with Methyl-Glcnac


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of C-Type Carbohydrate-Recognition Domain 4 of the Mannose Receptor Complexed with Methyl-Glcnac within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca801 b:7.0 occ:1.00 OD1 A:ASP748 2.3 7.1 1.0 OE1 A:GLU733 2.4 8.1 1.0 OD1 A:ASN727 2.4 8.7 1.0 OD1 A:ASN747 2.4 7.9 1.0 O A:ASP748 2.4 7.0 1.0 O4 A:2F8802 2.5 10.1 1.0 O3 A:2F8802 2.5 9.5 1.0 OE1 A:GLU725 2.6 10.0 1.0 CG A:ASP748 3.3 7.4 1.0 C4 A:2F8802 3.4 11.8 1.0 CD A:GLU733 3.4 8.1 1.0 C3 A:2F8802 3.4 13.2 1.0 CD A:GLU725 3.4 10.3 1.0 CG A:ASN727 3.4 8.8 1.0 CG A:ASN747 3.4 7.7 1.0 C A:ASP748 3.5 5.9 1.0 OE2 A:GLU725 3.7 12.5 1.0 OE2 A:GLU733 3.7 9.2 1.0 N A:ASP748 3.8 5.5 1.0 ND2 A:ASN747 3.8 9.7 1.0 ND2 A:ASN727 3.9 12.2 1.0 CA A:ASP748 4.0 5.7 1.0 OD2 A:ASP748 4.1 8.5 1.0 N A:ASN727 4.2 7.9 1.0 CB A:ASP748 4.2 7.3 1.0 CB A:TYR729 4.6 14.0 1.0 C A:ASN747 4.6 5.8 1.0 CB A:ASN727 4.6 8.2 1.0 N A:ILE749 4.6 5.7 0.5 N A:TYR729 4.7 10.1 1.0 N A:ILE749 4.7 6.8 0.5 CG A:GLU733 4.7 8.2 1.0 CG A:GLU725 4.7 9.5 1.0 N A:ASN728 4.7 8.4 1.0 CB A:ASN747 4.7 7.0 1.0 C2 A:2F8802 4.7 19.3 1.0 C5 A:2F8802 4.8 15.4 1.0 CA A:ASN727 4.8 8.9 1.0 CB A:GLU733 4.9 7.6 1.0 CA A:ASN747 4.9 5.8 1.0

H.Feinberg, S.A.F.Jegouzo, Y.Lasanajak, D.F.Smith, K.Drickamer, M.E.Taylor, W.I.Weis. Structural Analysis of Carbohydrate Binding By the Macrophage Mannose Receptor CD206 J.Biol.Chem. 2021.
ISSN: ESSN 1083-351X