Calcium in PDB 7m22: Cryo-Em Structure of the Hcmv Pentamer Bound By Human Neuropilin 2

The binding sites of Calcium atom in the Cryo-Em Structure of the Hcmv Pentamer Bound By Human Neuropilin 2 (pdb code 7m22). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of the Hcmv Pentamer Bound By Human Neuropilin 2, PDB code: 7m22:

Calcium binding site 1 out of 1 in the Cryo-Em Structure of the Hcmv Pentamer Bound By Human Neuropilin 2


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of the Hcmv Pentamer Bound By Human Neuropilin 2 within 5.0Å range: probe atom residue distance (Å) B Occ N:Ca700 b:20.0 occ:1.00 O N:VAL255 2.2 68.2 1.0 OD2 N:ASP211 2.2 57.4 1.0 OD1 N:ASP252 2.3 64.7 1.0 OD1 N:ASP211 2.4 57.4 1.0 OD2 N:ASP252 2.4 64.7 1.0 CG N:ASP252 2.5 64.7 1.0 CG N:ASP211 2.6 57.4 1.0 CG1 N:VAL255 2.7 68.2 1.0 C N:VAL255 3.2 68.2 1.0 N N:VAL255 3.5 68.2 1.0 CB N:ASP252 3.6 64.7 1.0 CA N:VAL255 3.6 68.2 1.0 N N:ASP252 3.7 64.7 1.0 CB N:VAL255 3.8 68.2 1.0 OH N:TYR169 3.9 63.1 1.0 CB N:ASP211 4.1 57.4 1.0 CA N:ASP252 4.1 64.7 1.0 NZ C:LYS47 4.1 85.1 1.0 N N:ALA256 4.3 69.3 1.0 C N:ASP252 4.6 64.7 1.0 O N:ASP252 4.7 64.7 1.0 CB N:TYR210 4.7 59.3 1.0 N N:ASP211 4.7 57.4 1.0 C N:ALA254 4.7 68.8 1.0 N N:ALA254 4.8 68.8 1.0 CA N:ALA256 4.8 69.3 1.0 C N:THR251 4.8 60.1 1.0 CZ N:TYR169 4.9 63.1 1.0 C N:TYR210 4.9 59.3 1.0 CG2 N:VAL255 4.9 68.2 1.0 CA N:ASP211 4.9 57.4 1.0 CE2 N:TYR169 4.9 63.1 1.0 CA N:THR251 5.0 60.1 1.0

D.Wrapp, X.Ye, Z.Ku, H.Su, H.G.Jones, N.Wang, A.K.Mishra, D.C.Freed, F.Li, A.Tang, L.Li, D.Jaijyan, H.Zhu, D.Wang, T.M.Fu, N.Zhang, Z.An, J.S.Mclellan. Cryo-Em Structure of the Hcmv Pentamer Bound to Host Receptor NRP2 and Mabs To Be Published.