Calcium in PDB 7mir: Cryo-Em Structure of Sidj-Sdea-Cam Reaction Intermediate Complex

All present enzymatic activity of Cryo-Em Structure of Sidj-Sdea-Cam Reaction Intermediate Complex:
2.4.2.31;

The structure of Cryo-Em Structure of Sidj-Sdea-Cam Reaction Intermediate Complex also contains other interesting chemical elements:

Magnesium

(Mg)

2 atoms

The binding sites of Calcium atom in the Cryo-Em Structure of Sidj-Sdea-Cam Reaction Intermediate Complex (pdb code 7mir). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Sidj-Sdea-Cam Reaction Intermediate Complex, PDB code: 7mir:

Calcium binding site 1 out of 1 in the Cryo-Em Structure of Sidj-Sdea-Cam Reaction Intermediate Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Sidj-Sdea-Cam Reaction Intermediate Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca201 b:52.9 occ:1.00 O B:THR27 2.3 46.5 1.0 OD1 B:ASP23 2.3 40.6 1.0 OD1 B:ASP25 2.5 39.8 1.0 OD1 B:ASP21 2.6 43.7 1.0 CG B:ASP23 3.0 40.6 1.0 HG1 B:THR27 3.2 46.5 1.0 CG B:ASP25 3.3 39.8 1.0 OD2 B:ASP23 3.3 40.6 1.0 C B:THR27 3.3 46.5 1.0 OD2 B:ASP25 3.4 39.8 1.0 H B:THR27 3.5 46.5 1.0 HA B:ILE28 3.6 50.7 1.0 OG1 B:THR27 3.6 46.5 1.0 H B:ASP23 3.7 40.6 1.0 H B:ASP25 3.7 39.8 1.0 CG B:ASP21 3.8 43.7 1.0 HA B:ASP21 4.2 43.7 1.0 N B:ILE28 4.2 50.7 1.0 N B:THR27 4.2 46.5 1.0 CA B:THR27 4.2 46.5 1.0 CA B:ILE28 4.3 50.7 1.0 CB B:ASP23 4.3 40.6 1.0 H B:GLY24 4.4 38.9 1.0 OD2 B:ASP21 4.4 43.7 1.0 H B:LYS22 4.4 43.5 1.0 N B:ASP23 4.4 40.6 1.0 H B:THR29 4.5 57.6 1.0 CB B:THR27 4.5 46.5 1.0 HB3 B:ASP23 4.5 40.6 1.0 N B:ASP25 4.6 39.8 1.0 CB B:ASP25 4.6 39.8 1.0 N B:LYS22 4.8 43.5 1.0 N B:GLY24 4.8 38.9 1.0 CB B:ASP21 4.8 43.7 1.0 CA B:ASP21 4.8 43.7 1.0 CA B:ASP23 4.8 40.6 1.0 N B:THR29 4.8 57.6 1.0 HB3 B:ASP25 4.9 39.8 1.0 C B:ILE28 4.9 50.7 1.0 C B:ASP21 5.0 43.7 1.0 H B:GLY26 5.0 41.4 1.0 HB2 B:ASP21 5.0 43.7 1.0 HG22 B:ILE28 5.0 50.7 1.0 H B:ILE28 5.0 50.7 1.0

A.Osinski, M.Black, K.Pawlowski, Z.Chen, Y.Li, V.Tagliabracci. Structural and Mechanistic Basis For Protein Glutamylation By the Kinase Fold To Be Published.