Calcium in PDB 7mis: Cryo-Em Structure of Sidj-Sdec-Cam Reaction Intermediate Complex

Other elements in 7mis:

The structure of Cryo-Em Structure of Sidj-Sdec-Cam Reaction Intermediate Complex also contains other interesting chemical elements:

Sodium (Na) 1 atom
Magnesium (Mg) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Cryo-Em Structure of Sidj-Sdec-Cam Reaction Intermediate Complex (pdb code 7mis). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Sidj-Sdec-Cam Reaction Intermediate Complex, PDB code: 7mis:

Calcium binding site 1 out of 1 in 7mis

Go back to Calcium Binding Sites List in 7mis
Calcium binding site 1 out of 1 in the Cryo-Em Structure of Sidj-Sdec-Cam Reaction Intermediate Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Sidj-Sdec-Cam Reaction Intermediate Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca201

b:59.8
occ:1.00
O B:THR27 2.3 45.8 1.0
OD1 B:ASP23 2.3 37.7 1.0
OD2 B:ASP25 2.4 37.4 1.0
OD1 B:ASP21 2.4 40.1 1.0
CG B:ASP25 2.7 37.4 1.0
OD1 B:ASP25 2.7 37.4 1.0
H B:ASP25 3.2 37.4 1.0
CG B:ASP23 3.2 37.7 1.0
HG1 B:THR27 3.2 45.8 1.0
H B:THR27 3.3 45.8 1.0
OD2 B:ASP23 3.4 37.7 1.0
C B:THR27 3.4 45.8 1.0
CG B:ASP21 3.6 40.1 1.0
H B:ASP23 3.7 37.7 1.0
OG1 B:THR27 3.8 45.8 1.0
HA B:ILE28 3.8 48.7 1.0
CB B:ASP25 4.0 37.4 1.0
N B:ASP25 4.0 37.4 1.0
N B:THR27 4.1 45.8 1.0
OD2 B:ASP21 4.1 40.1 1.0
H B:GLY24 4.2 35.2 1.0
HB3 B:ASP25 4.2 37.4 1.0
CA B:THR27 4.2 45.8 1.0
HA B:ASP21 4.3 40.1 1.0
N B:ILE28 4.4 48.7 1.0
H B:GLY26 4.4 38.7 1.0
N B:ASP23 4.5 37.7 1.0
N B:GLY24 4.5 35.2 1.0
CA B:ASP25 4.5 37.4 1.0
H B:LYS22 4.6 39.9 1.0
CB B:ASP23 4.6 37.7 1.0
CA B:ILE28 4.6 48.7 1.0
CB B:THR27 4.6 45.8 1.0
CB B:ASP21 4.7 40.1 1.0
HB2 B:ASP25 4.7 37.4 1.0
N B:GLY26 4.8 38.7 1.0
HG23 B:THR29 4.8 59.6 1.0
C B:ASP23 4.8 37.7 1.0
CA B:ASP21 4.8 40.1 1.0
CA B:ASP23 4.9 37.7 1.0
N B:LYS22 4.9 39.9 1.0
HG22 B:ILE28 4.9 48.7 1.0
C B:ASP25 4.9 37.4 1.0
C B:ASP21 5.0 40.1 1.0
HB2 B:ASP21 5.0 40.1 1.0

Reference:

A.Osinski, M.Black, K.Pawlowski, Z.Chen, Y.Li, V.Tagliabracci. Structural and Mechanistic Basis For Protein Glutamylation By the Kinase Fold To Be Published.
Page generated: Sat Aug 21 12:40:08 2021

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