Calcium in PDB 7miy: Voltage-Gated Calcium Channel

The binding sites of Calcium atom in the Voltage-Gated Calcium Channel (pdb code 7miy). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Voltage-Gated Calcium Channel, PDB code: 7miy:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Voltage-Gated Calcium Channel


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Voltage-Gated Calcium Channel within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2402 b:34.1 occ:1.00 OE1 A:GLU1365 2.5 22.5 1.0 OE2 A:GLU314 2.5 20.1 1.0 OE1 A:GLU663 2.8 24.0 1.0 OE2 A:GLU1365 3.1 22.5 1.0 OE1 A:GLU314 3.1 20.1 1.0 CD A:GLU314 3.1 20.1 1.0 CD A:GLU1365 3.1 22.5 1.0 O A:GLY1654 3.6 18.4 1.0 CD A:GLU663 3.8 24.0 1.0 O A:GLU1655 4.2 22.3 1.0 OE2 A:GLU663 4.2 24.0 1.0 OE2 A:GLU1655 4.3 22.3 1.0 O A:MET313 4.3 16.4 1.0 CA A:GLU1655 4.4 22.3 1.0 CG A:GLU314 4.5 20.1 1.0 CG A:GLU1365 4.6 22.5 1.0 C A:GLY1654 4.6 18.4 1.0 C A:GLU1655 4.8 22.3 1.0 CA A:GLU314 4.9 20.1 1.0 CD A:GLU1655 5.0 22.3 1.0

Calcium binding site 2 out of 2 in the Voltage-Gated Calcium Channel


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Voltage-Gated Calcium Channel within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca2003 b:27.0 occ:1.00 OG D:SER263 2.4 21.1 1.0 OG1 D:THR331 2.5 26.3 1.0 OD2 A:ASP122 2.6 24.1 1.0 OG D:SER261 2.9 20.8 1.0 CG A:ASP122 3.6 24.1 1.0 CB D:THR331 3.7 26.3 1.0 CB D:SER263 3.7 21.1 1.0 CB D:SER261 3.7 20.8 1.0 OD2 D:ASP259 3.8 20.7 1.0 OD1 A:ASP122 3.9 24.1 1.0 N D:THR331 4.4 26.3 1.0 OD1 D:ASP259 4.5 20.7 1.0 CG2 D:THR331 4.6 26.3 1.0 N D:SER263 4.6 21.1 1.0 CG D:ASP259 4.6 20.7 1.0 OD1 D:ASP363 4.6 27.3 1.0 CA D:THR331 4.7 26.3 1.0 O D:GLY364 4.7 27.0 1.0 CA D:SER263 4.7 21.1 1.0 CB A:ASP122 4.9 24.1 1.0

S.Gao, X.Yao, N.Yan. Structure of Human CAV2.2 Channel Blocked By the Painkiller Ziconotide Nature 2021.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-021-03699-6