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Calcium in PDB 7nf8: Ovine (B0,+at-Rbat)2 Hetero-Tetramer, Asymmetric Unit, Rigid-Body Fitted

Calcium Binding Sites:

The binding sites of Calcium atom in the Ovine (B0,+at-Rbat)2 Hetero-Tetramer, Asymmetric Unit, Rigid-Body Fitted (pdb code 7nf8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Ovine (B0,+at-Rbat)2 Hetero-Tetramer, Asymmetric Unit, Rigid-Body Fitted, PDB code: 7nf8:

Calcium binding site 1 out of 1 in 7nf8

Go back to Calcium Binding Sites List in 7nf8
Calcium binding site 1 out of 1 in the Ovine (B0,+at-Rbat)2 Hetero-Tetramer, Asymmetric Unit, Rigid-Body Fitted


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Ovine (B0,+at-Rbat)2 Hetero-Tetramer, Asymmetric Unit, Rigid-Body Fitted within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca702

b:22.5
occ:1.00
OE2 A:GLU321 2.4 31.1 1.0
O A:TYR318 2.4 26.6 1.0
OD1 A:ASN214 2.5 27.1 1.0
OD2 A:ASP284 2.5 28.6 1.0
O A:LEU319 2.7 25.6 1.0
C A:LEU319 3.4 25.6 1.0
CD A:GLU321 3.5 31.1 1.0
CG A:ASP284 3.5 28.6 1.0
CG A:ASN214 3.6 27.1 1.0
C A:TYR318 3.6 26.6 1.0
CB A:ASP284 3.8 28.6 1.0
CA A:LEU319 3.8 25.6 1.0
OE1 A:GLU321 3.9 31.1 1.0
ND2 A:ASN214 4.1 27.1 1.0
O A:LEU285 4.2 27.2 1.0
N A:LEU319 4.2 25.6 1.0
NE2 A:GLN277 4.4 28.9 1.0
O A:ASN214 4.4 27.1 1.0
N A:LEU320 4.4 27.0 1.0
OD1 A:ASP284 4.7 28.6 1.0
CG A:GLN277 4.7 28.9 1.0
CG A:GLU321 4.8 31.1 1.0
CA A:TYR318 4.8 26.6 1.0
CE2 A:PHE275 4.8 29.3 1.0
CB A:ASN214 4.8 27.1 1.0
CB A:TYR318 4.8 26.6 1.0
CA A:ASP284 4.9 28.6 1.0
CA A:LEU320 5.0 27.0 1.0

Reference:

Y.Lee, P.Wiriyasermkul, P.Kongpracha, S.Moriyama, D.J.Mills, W.Kuhlbrandt, S.Nagamori. Ca 2+ -Mediated Higher-Order Assembly of Heterodimers in Amino Acid Transport System B 0,+ Biogenesis and Cystinuria. Nat Commun V. 13 2708 2022.
ISSN: ESSN 2041-1723
PubMed: 35577790
DOI: 10.1038/S41467-022-30293-9
Page generated: Tue Apr 4 18:19:54 2023

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