Atomistry » Calcium » PDB 7nif-7o1w » 7nlm
Atomistry »
  Calcium »
    PDB 7nif-7o1w »
      7nlm »

Calcium in PDB 7nlm: Lasb, N-Aryl-2-Butylmercaptoacetamide

Protein crystallography data

The structure of Lasb, N-Aryl-2-Butylmercaptoacetamide, PDB code: 7nlm was solved by J.Koehnke, A.Sikandar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.97 / 1.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 40.703, 89.931, 41.245, 90, 114.34, 90
R / Rfree (%) 17.8 / 20.3

Other elements in 7nlm:

The structure of Lasb, N-Aryl-2-Butylmercaptoacetamide also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Lasb, N-Aryl-2-Butylmercaptoacetamide (pdb code 7nlm). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Lasb, N-Aryl-2-Butylmercaptoacetamide, PDB code: 7nlm:

Calcium binding site 1 out of 1 in 7nlm

Go back to Calcium Binding Sites List in 7nlm
Calcium binding site 1 out of 1 in the Lasb, N-Aryl-2-Butylmercaptoacetamide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Lasb, N-Aryl-2-Butylmercaptoacetamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:22.7
occ:1.00
O A:LEU185 2.2 13.7 1.0
OE2 A:GLU172 2.4 17.1 1.0
OE1 A:GLU175 2.4 18.0 1.0
O A:HOH430 2.4 20.7 1.0
OD1 A:ASP183 2.4 13.1 1.0
OD1 A:ASP136 2.5 17.1 1.0
OE2 A:GLU175 2.7 19.2 1.0
CD A:GLU175 2.9 18.3 1.0
CD A:GLU172 3.2 14.1 1.0
OE1 A:GLU172 3.4 15.2 1.0
C A:LEU185 3.4 13.3 1.0
CG A:ASP183 3.5 15.0 1.0
CG A:ASP136 3.7 16.4 1.0
OD2 A:ASP183 3.8 15.6 1.0
N A:LEU185 3.9 13.1 1.0
O A:HOH467 4.1 26.9 1.0
CB A:ASP136 4.2 15.3 1.0
CA A:LEU185 4.2 13.5 1.0
N A:ILE186 4.4 13.0 1.0
CG A:GLU175 4.4 19.9 1.0
CA A:ILE186 4.5 13.5 1.0
N A:PHE184 4.6 12.2 1.0
O A:HOH522 4.6 18.1 1.0
N A:ASP183 4.6 12.7 1.0
CG A:GLU172 4.6 9.8 1.0
CB A:LEU185 4.7 12.9 1.0
OD2 A:ASP136 4.7 21.7 1.0
CB A:ASP183 4.8 13.5 1.0
O A:HOH581 4.9 34.7 1.0
N A:GLY187 4.9 14.8 1.0
C A:PHE184 4.9 13.1 1.0

Reference:

J.Koehnke, A.Sikandar. Lasb, N-Aryl-2-Butylmercaptoacetamide Inhibitor Complex To Be Published.
Page generated: Fri Jul 19 02:19:00 2024

Last articles

Cl in 6COG
Cl in 6CST
Cl in 6CTW
Cl in 6CTZ
Cl in 6CTT
Cl in 6CSP
Cl in 6CU9
Cl in 6CTX
Cl in 6CTU
Cl in 6CTP
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy