Atomistry » Calcium » PDB 7or8-7p9r » 7p4w
Atomistry »
  Calcium »
    PDB 7or8-7p9r »
      7p4w »

Calcium in PDB 7p4w: Crystal Structure of Alpha-Amylase From Aspergillus Oryzae in Space Group I222

Enzymatic activity of Crystal Structure of Alpha-Amylase From Aspergillus Oryzae in Space Group I222

All present enzymatic activity of Crystal Structure of Alpha-Amylase From Aspergillus Oryzae in Space Group I222:
3.2.1.1;

Protein crystallography data

The structure of Crystal Structure of Alpha-Amylase From Aspergillus Oryzae in Space Group I222, PDB code: 7p4w was solved by D.Bellini, F.Gorrec, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 51.91 / 2.28
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 65.725, 140.402, 154.218, 90, 90, 90
R / Rfree (%) 22.8 / 28.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Alpha-Amylase From Aspergillus Oryzae in Space Group I222 (pdb code 7p4w). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Alpha-Amylase From Aspergillus Oryzae in Space Group I222, PDB code: 7p4w:

Calcium binding site 1 out of 1 in 7p4w

Go back to Calcium Binding Sites List in 7p4w
Calcium binding site 1 out of 1 in the Crystal Structure of Alpha-Amylase From Aspergillus Oryzae in Space Group I222


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Alpha-Amylase From Aspergillus Oryzae in Space Group I222 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:65.8
occ:1.00
O A:HOH617 2.3 65.1 1.0
O A:HIS210 2.3 70.6 1.0
O A:HOH601 2.4 60.9 1.0
OD1 A:ASN121 2.4 62.5 1.0
O A:GLU162 2.4 67.5 1.0
OD1 A:ASP175 2.6 69.8 1.0
OD2 A:ASP175 2.6 71.4 1.0
O A:HOH628 2.9 70.4 1.0
CG A:ASP175 2.9 70.5 1.0
C A:GLU162 3.4 69.1 1.0
C A:HIS210 3.4 67.2 1.0
CG A:ASN121 3.5 57.7 1.0
ND2 A:ASN121 3.9 61.0 1.0
CA A:GLU162 4.0 70.6 1.0
CB A:HIS210 4.2 61.4 1.0
N A:VAL211 4.3 61.3 1.0
CA A:HIS210 4.3 65.5 1.0
N A:ASP163 4.3 72.5 1.0
O A:VAL161 4.4 66.7 1.0
CB A:ASP175 4.4 65.7 1.0
CA A:VAL211 4.5 62.9 1.0
O A:ASN121 4.5 62.0 1.0
CD2 A:HIS147 4.5 76.3 1.0
CG2 A:VAL211 4.6 57.8 1.0
O A:CYS164 4.6 66.8 1.0
NE2 A:HIS147 4.6 78.8 1.0
O A:LEU176 4.7 72.5 1.0
CA A:ASP163 4.7 73.7 1.0
CB A:ASN121 4.8 49.0 1.0
CB A:GLU162 4.9 71.9 1.0

Reference:

D.Bellini, F.Gorrec, J.Lowe. The Fusion Protein Crystallization Screen To Be Published.
Page generated: Fri Jul 19 02:43:39 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy