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Calcium in PDB 7p8e: Crystal Structure of the Receiver Domain of M. Truncatula Cytokinin Receptor MTCRE1

Enzymatic activity of Crystal Structure of the Receiver Domain of M. Truncatula Cytokinin Receptor MTCRE1

All present enzymatic activity of Crystal Structure of the Receiver Domain of M. Truncatula Cytokinin Receptor MTCRE1:
2.7.13.3;

Protein crystallography data

The structure of Crystal Structure of the Receiver Domain of M. Truncatula Cytokinin Receptor MTCRE1, PDB code: 7p8e was solved by L.H.Tran, A.Urbanowicz, M.Jasinski, M.Jaskolski, M.Ruszkowski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.13 / 2.50
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.189, 60.189, 80.41, 90, 90, 120
R / Rfree (%) 17.3 / 22.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Receiver Domain of M. Truncatula Cytokinin Receptor MTCRE1 (pdb code 7p8e). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Receiver Domain of M. Truncatula Cytokinin Receptor MTCRE1, PDB code: 7p8e:

Calcium binding site 1 out of 1 in 7p8e

Go back to Calcium Binding Sites List in 7p8e
Calcium binding site 1 out of 1 in the Crystal Structure of the Receiver Domain of M. Truncatula Cytokinin Receptor MTCRE1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Receiver Domain of M. Truncatula Cytokinin Receptor MTCRE1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1001

b:54.8
occ:1.00
OD2 A:ASP912 2.3 70.0 1.0
O A:HOH1103 2.3 53.8 1.0
OD2 A:ASP959 2.3 77.7 1.0
OD1 A:ASP868 2.4 80.9 1.0
O A:GLN914 2.6 43.8 1.0
CG A:ASP959 3.1 71.8 1.0
CG A:ASP912 3.1 73.1 1.0
OD1 A:ASP959 3.2 69.4 1.0
CG A:ASP868 3.3 76.4 1.0
OD1 A:ASP867 3.3 78.0 1.0
OD1 A:ASP912 3.4 86.9 1.0
OD2 A:ASP868 3.4 82.2 1.0
C A:GLN914 3.7 59.9 1.0
CG A:ASP867 4.1 74.4 1.0
OD2 A:ASP867 4.2 80.6 1.0
CB A:ASP912 4.4 48.1 1.0
CB A:GLN914 4.4 68.1 1.0
O A:HOH1101 4.4 30.0 1.0
CB A:ASP959 4.5 48.6 1.0
CA A:GLN914 4.5 64.5 1.0
N A:ASP868 4.6 47.2 1.0
CG A:MET915 4.7 45.3 1.0
CB A:ASP868 4.7 49.1 1.0
N A:GLN914 4.7 63.2 1.0
N A:MET915 4.8 46.4 1.0
ND2 A:ASN872 4.9 71.0 1.0
CB A:ASN869 4.9 66.2 1.0
CA A:MET915 4.9 48.9 1.0

Reference:

L.H.Tran, A.Urbanowicz, M.Jasinski, M.Jaskolski, M.Ruszkowski. 3D Domain Swapping Dimerization of the Receiver Domain of Cytokinin Receptor CRE1 From Arabidopsis Thaliana and Medicago Truncatula . Front Plant Sci V. 12 56341 2021.
ISSN: ESSN 1664-462X
PubMed: 34630499
DOI: 10.3389/FPLS.2021.756341
Page generated: Fri Jul 19 02:48:18 2024

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