Calcium in PDB 7qcn: Structure of the Mucin-2 Cterminal Domains: Vwcn to Til Domains with A C2 Symmetry
Calcium Binding Sites:
The binding sites of Calcium atom in the Structure of the Mucin-2 Cterminal Domains: Vwcn to Til Domains with A C2 Symmetry
(pdb code 7qcn). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Structure of the Mucin-2 Cterminal Domains: Vwcn to Til Domains with A C2 Symmetry, PDB code: 7qcn:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 7qcn
Go back to
Calcium Binding Sites List in 7qcn
Calcium binding site 1 out
of 2 in the Structure of the Mucin-2 Cterminal Domains: Vwcn to Til Domains with A C2 Symmetry
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Structure of the Mucin-2 Cterminal Domains: Vwcn to Til Domains with A C2 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca5201
b:40.0
occ:1.00
|
O
|
A:THR4575
|
2.5
|
40.0
|
1.0
|
OG1
|
A:THR4577
|
2.6
|
40.0
|
1.0
|
OD1
|
A:ASP4583
|
2.6
|
40.0
|
1.0
|
OD1
|
A:ASP4582
|
2.7
|
40.0
|
1.0
|
OD2
|
A:ASP4444
|
2.7
|
40.0
|
1.0
|
O
|
A:THR4579
|
2.7
|
40.0
|
1.0
|
O
|
A:ASP4582
|
2.7
|
40.0
|
1.0
|
OG1
|
A:THR4575
|
2.8
|
40.0
|
1.0
|
C
|
A:ASP4582
|
3.5
|
40.0
|
1.0
|
C
|
A:THR4575
|
3.5
|
40.0
|
1.0
|
CG
|
A:ASP4582
|
3.5
|
40.0
|
1.0
|
CG
|
A:ASP4583
|
3.6
|
40.0
|
1.0
|
N
|
A:THR4577
|
3.8
|
40.0
|
1.0
|
C
|
A:THR4579
|
3.8
|
40.0
|
1.0
|
CG
|
A:ASP4444
|
3.9
|
40.0
|
1.0
|
CB
|
A:THR4577
|
3.9
|
40.0
|
1.0
|
CB
|
A:THR4575
|
4.0
|
40.0
|
1.0
|
CA
|
A:THR4575
|
4.1
|
40.0
|
1.0
|
OD2
|
A:ASP4583
|
4.2
|
40.0
|
1.0
|
N
|
A:ASP4583
|
4.2
|
40.0
|
1.0
|
CA
|
A:THR4577
|
4.2
|
40.0
|
1.0
|
OD2
|
A:ASP4582
|
4.2
|
40.0
|
1.0
|
CA
|
A:ASP4582
|
4.3
|
40.0
|
1.0
|
N
|
A:THR4575
|
4.3
|
40.0
|
1.0
|
CB
|
A:ASP4582
|
4.3
|
40.0
|
1.0
|
CA
|
A:ASP4583
|
4.4
|
40.0
|
1.0
|
N
|
A:ASP4582
|
4.4
|
40.0
|
1.0
|
C
|
A:THR4577
|
4.5
|
40.0
|
1.0
|
N
|
A:CYS4576
|
4.5
|
40.0
|
1.0
|
CA
|
A:THR4580
|
4.6
|
40.0
|
1.0
|
CB
|
A:ASP4583
|
4.6
|
40.0
|
1.0
|
N
|
A:THR4579
|
4.6
|
40.0
|
1.0
|
N
|
A:THR4580
|
4.6
|
40.0
|
1.0
|
CG2
|
A:THR4577
|
4.7
|
40.0
|
1.0
|
CB
|
A:ASP4444
|
4.7
|
40.0
|
1.0
|
CA
|
A:THR4579
|
4.7
|
40.0
|
1.0
|
C
|
A:CYS4576
|
4.7
|
40.0
|
1.0
|
OD1
|
A:ASP4444
|
4.7
|
40.0
|
1.0
|
N
|
A:ASN4578
|
4.7
|
40.0
|
1.0
|
CA
|
A:CYS4576
|
4.8
|
40.0
|
1.0
|
O
|
A:THR4577
|
4.9
|
40.0
|
1.0
|
C
|
A:THR4580
|
4.9
|
40.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 7qcn
Go back to
Calcium Binding Sites List in 7qcn
Calcium binding site 2 out
of 2 in the Structure of the Mucin-2 Cterminal Domains: Vwcn to Til Domains with A C2 Symmetry
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Structure of the Mucin-2 Cterminal Domains: Vwcn to Til Domains with A C2 Symmetry within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca5201
b:40.0
occ:1.00
|
O
|
B:THR4575
|
2.5
|
40.0
|
1.0
|
OG1
|
B:THR4577
|
2.6
|
40.0
|
1.0
|
OD1
|
B:ASP4583
|
2.6
|
40.0
|
1.0
|
OD1
|
B:ASP4582
|
2.7
|
40.0
|
1.0
|
OD2
|
B:ASP4444
|
2.7
|
40.0
|
1.0
|
O
|
B:THR4579
|
2.7
|
40.0
|
1.0
|
O
|
B:ASP4582
|
2.7
|
40.0
|
1.0
|
OG1
|
B:THR4575
|
2.8
|
40.0
|
1.0
|
C
|
B:ASP4582
|
3.5
|
40.0
|
1.0
|
C
|
B:THR4575
|
3.5
|
40.0
|
1.0
|
CG
|
B:ASP4582
|
3.5
|
40.0
|
1.0
|
CG
|
B:ASP4583
|
3.6
|
40.0
|
1.0
|
N
|
B:THR4577
|
3.7
|
40.0
|
1.0
|
C
|
B:THR4579
|
3.8
|
40.0
|
1.0
|
CG
|
B:ASP4444
|
3.9
|
40.0
|
1.0
|
CB
|
B:THR4577
|
3.9
|
40.0
|
1.0
|
CB
|
B:THR4575
|
4.0
|
40.0
|
1.0
|
CA
|
B:THR4575
|
4.1
|
40.0
|
1.0
|
OD2
|
B:ASP4583
|
4.2
|
40.0
|
1.0
|
N
|
B:ASP4583
|
4.2
|
40.0
|
1.0
|
CA
|
B:THR4577
|
4.2
|
40.0
|
1.0
|
OD2
|
B:ASP4582
|
4.2
|
40.0
|
1.0
|
CA
|
B:ASP4582
|
4.3
|
40.0
|
1.0
|
N
|
B:THR4575
|
4.3
|
40.0
|
1.0
|
CB
|
B:ASP4582
|
4.3
|
40.0
|
1.0
|
CA
|
B:ASP4583
|
4.4
|
40.0
|
1.0
|
N
|
B:ASP4582
|
4.4
|
40.0
|
1.0
|
C
|
B:THR4577
|
4.5
|
40.0
|
1.0
|
N
|
B:CYS4576
|
4.5
|
40.0
|
1.0
|
CA
|
B:THR4580
|
4.6
|
40.0
|
1.0
|
CB
|
B:ASP4583
|
4.6
|
40.0
|
1.0
|
N
|
B:THR4579
|
4.6
|
40.0
|
1.0
|
N
|
B:THR4580
|
4.6
|
40.0
|
1.0
|
CG2
|
B:THR4577
|
4.7
|
40.0
|
1.0
|
CB
|
B:ASP4444
|
4.7
|
40.0
|
1.0
|
CA
|
B:THR4579
|
4.7
|
40.0
|
1.0
|
C
|
B:CYS4576
|
4.7
|
40.0
|
1.0
|
OD1
|
B:ASP4444
|
4.7
|
40.0
|
1.0
|
N
|
B:ASN4578
|
4.7
|
40.0
|
1.0
|
CA
|
B:CYS4576
|
4.8
|
40.0
|
1.0
|
O
|
B:THR4577
|
4.9
|
40.0
|
1.0
|
C
|
B:THR4580
|
4.9
|
40.0
|
1.0
|
|
Reference:
P.Gallego,
G.C.Hansson.
Structural Characterization of MUCIN2 C-Terminal Region To Be Published.
Page generated: Fri Jul 19 03:26:54 2024
|