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Calcium in PDB 7t9u: Crystal Structure of Hsting with An Agonist (SHR169224)

Protein crystallography data

The structure of Crystal Structure of Hsting with An Agonist (SHR169224), PDB code: 7t9u was solved by R.Chowdhury, M.Miller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.95 / 2.46
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 79.906, 89.348, 73.298, 90, 90, 90
R / Rfree (%) 22.4 / 23.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Hsting with An Agonist (SHR169224) (pdb code 7t9u). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Hsting with An Agonist (SHR169224), PDB code: 7t9u:

Calcium binding site 1 out of 1 in 7t9u

Go back to Calcium Binding Sites List in 7t9u
Calcium binding site 1 out of 1 in the Crystal Structure of Hsting with An Agonist (SHR169224)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Hsting with An Agonist (SHR169224) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:76.5
occ:1.00
O A:HOH505 2.3 56.8 1.0
OE2 A:GLU316 2.4 96.6 1.0
OD2 A:ASP205 2.4 66.7 1.0
OE1 A:GLU316 2.6 80.8 1.0
CD A:GLU316 2.9 87.3 1.0
CG A:ASP205 3.4 69.0 1.0
OD1 A:ASP205 3.6 68.8 1.0
O A:HOH503 4.1 50.7 1.0
CG A:GLU316 4.4 78.7 1.0
CB A:ASP205 4.8 62.8 1.0
O A:GLY207 4.8 58.6 1.0
CB A:PRO203 5.0 59.4 1.0
CB A:GLU316 5.0 86.0 1.0

Reference:

C.Song, D.Liu, S.Liu, D.Li, I.Horecny, X.Zhang, P.Li, L.Chen, M.Miller, R.Chowdhury, M.Issa, R.Shen, Y.Yan, F.Zhang, L.Zhang, L.Zhang, C.Bai, J.Feng, L.Zhuang, R.Zhang, J.Li, H.Wilkinson, J.Liu, W.Tao. SHR1032, A Novel Sting Agonist, Stimulates Anti-Tumor Immunity and Directly Induces Aml Apoptosis. Sci Rep V. 12 8579 2022.
ISSN: ESSN 2045-2322
PubMed: 35595822
DOI: 10.1038/S41598-022-12449-1
Page generated: Tue Apr 4 18:45:28 2023

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