Calcium in PDB 7tba: Pentraxin - Ligand Complex

The structure of Pentraxin - Ligand Complex, PDB code: 7tba was solved by K.S.C.T.Shing, C.J.Morton, M.W.Parker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.54 / 3.50
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	72.568, 98.172, 160.4, 89.08, 89.76, 87.48
R / Rfree (%)	21.2 / 26

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40;

Binding sites:

The binding sites of Calcium atom in the Pentraxin - Ligand Complex (pdb code 7tba). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 40 binding sites of Calcium where determined in the Pentraxin - Ligand Complex, PDB code: 7tba:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca302 b:53.2 occ:1.00 OD1 A:ASP140 2.3 58.8 1.0 HG3 A:GLU147 2.4 84.7 1.0 OD2 A:ASP140 2.4 66.5 1.0 O15 A:XQY301 2.6 65.8 1.0 CG A:ASP140 2.6 63.7 1.0 OE1 A:GLN150 2.8 64.1 1.0 OE1 A:GLU138 2.8 63.5 1.0 OE2 A:GLU147 2.9 66.3 1.0 O14 A:XQY301 3.2 74.8 1.0 CG A:GLU147 3.2 70.3 1.0 HB3 A:GLU138 3.3 62.4 1.0 CD A:GLU147 3.5 69.4 1.0 P13 A:XQY301 3.5 73.5 1.0 HB2 A:GLU147 3.5 76.4 1.0 HE22 A:GLN150 3.7 73.6 1.0 CD A:GLN150 3.8 61.7 1.0 H A:GLU147 3.9 73.2 1.0 CB A:GLU147 3.9 63.4 1.0 CD A:GLU138 4.0 59.7 1.0 HG2 A:GLU147 4.0 84.7 1.0 CB A:ASP140 4.0 65.9 1.0 O A:GLU138 4.1 58.5 1.0 NE2 A:GLN150 4.2 61.1 1.0 O A:ASN145 4.2 65.2 1.0 CB A:GLU138 4.2 51.7 1.0 O16 A:XQY301 4.3 78.3 1.0 HB2 A:ASP140 4.3 79.4 1.0 N A:GLU147 4.4 60.7 1.0 N A:ASP140 4.4 58.6 1.0 HA A:ASP140 4.5 75.7 1.0 C A:GLU138 4.5 56.1 1.0 CG A:GLU138 4.5 55.8 1.0 H A:ASP140 4.6 70.7 1.0 CA A:ASP140 4.6 62.8 1.0 CA A:CA303 4.6 61.2 1.0 HG3 A:GLU138 4.6 67.3 1.0 C A:GLN139 4.6 58.0 1.0 HB3 A:ASP140 4.6 79.4 1.0 OE1 A:GLU147 4.7 68.5 1.0 HB3 A:GLU147 4.7 76.4 1.0 O A:GLN139 4.7 55.4 1.0 HA A:PHE146 4.7 70.3 1.0 H122 A:XQY301 4.7 77.0 1.0 HB2 A:GLN150 4.8 71.4 1.0 HB2 A:GLU138 4.8 62.4 1.0 CA A:GLU147 4.8 58.4 1.0 C12 A:XQY301 4.9 63.9 1.0 OE2 A:GLU138 5.0 58.0 1.0

Calcium binding site 2 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca303 b:61.2 occ:1.00 O A:GLN139 2.3 55.4 1.0 OD1 A:ASN61 2.4 70.3 1.0 OE2 A:GLU138 2.4 58.0 1.0 O14 A:XQY301 2.6 74.8 1.0 OE1 A:GLU138 2.7 63.5 1.0 CD A:GLU138 2.9 59.7 1.0 HA A:ASP140 3.2 75.7 1.0 HD21 A:ASN61 3.3 100.2 1.0 CG A:ASN61 3.4 74.2 1.0 OD1 A:ASP140 3.4 58.8 1.0 C A:GLN139 3.4 58.0 1.0 H122 A:XQY301 3.4 77.0 1.0 HB2 A:ASP60 3.4 72.5 1.0 H121 A:XQY301 3.5 77.0 1.0 P13 A:XQY301 3.6 73.5 1.0 CG A:ASP60 3.6 66.5 1.0 OD2 A:ASP60 3.7 59.2 1.0 C12 A:XQY301 3.7 63.9 1.0 ND2 A:ASN61 3.7 83.2 1.0 O A:ASP60 3.8 56.2 1.0 OD1 A:ASP60 4.0 72.0 1.0 CA A:ASP140 4.0 62.8 1.0 CB A:ASP60 4.0 60.1 1.0 N A:ASP140 4.1 58.6 1.0 C A:ASP60 4.3 59.6 1.0 CG A:GLU138 4.4 55.8 1.0 H A:GLN139 4.4 67.6 1.0 O15 A:XQY301 4.4 65.8 1.0 HD22 A:LEU64 4.5 70.4 1.0 CG A:ASP140 4.5 63.7 1.0 N A:GLN139 4.5 56.0 1.0 HD22 A:ASN61 4.6 100.2 1.0 CA A:GLN139 4.6 55.5 1.0 CA A:CA302 4.6 53.2 1.0 O16 A:XQY301 4.7 78.3 1.0 HG3 A:GLU138 4.7 67.3 1.0 HA A:ASN61 4.7 87.9 1.0 HG2 A:GLU138 4.7 67.3 1.0 CB A:ASN61 4.7 69.9 1.0 HB3 A:ASP60 4.8 72.5 1.0 N A:ASN61 4.8 78.3 1.0 CA A:ASP60 4.8 58.4 1.0 CB A:ASP140 4.8 65.9 1.0 HB2 A:GLN139 4.9 63.4 1.0 HD13 A:LEU64 4.9 63.9 1.0 H A:ASP140 4.9 70.7 1.0

Calcium binding site 3 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca302 b:52.5 occ:1.00 OE1 B:GLN150 2.4 63.3 1.0 OE1 B:GLU138 2.5 60.0 1.0 O15 B:XQY301 2.5 67.1 1.0 OD1 B:ASP140 2.7 63.3 1.0 HG3 B:GLU147 2.8 86.4 1.0 HB3 B:GLU138 2.9 63.7 1.0 OD2 B:ASP140 3.0 73.3 1.0 CG B:ASP140 3.1 65.5 1.0 HB2 B:GLU147 3.3 91.4 1.0 HE22 B:GLN150 3.4 81.4 1.0 CD B:GLN150 3.4 62.2 1.0 OE2 B:GLU147 3.4 72.0 1.0 O14 B:XQY301 3.4 66.4 1.0 CG B:GLU147 3.6 71.7 1.0 P13 B:XQY301 3.6 75.2 1.0 CD B:GLU138 3.6 55.2 1.0 H B:GLU147 3.7 96.7 1.0 NE2 B:GLN150 3.8 67.5 1.0 CB B:GLU138 3.8 52.8 1.0 O B:GLU138 3.9 64.8 1.0 CD B:GLU147 3.9 71.7 1.0 CB B:GLU147 3.9 75.9 1.0 CG B:GLU138 4.1 52.3 1.0 HG3 B:GLU138 4.2 63.1 1.0 C B:GLU138 4.2 54.7 1.0 N B:GLU147 4.3 80.3 1.0 HB2 B:GLU138 4.3 63.7 1.0 HG2 B:GLU147 4.4 86.4 1.0 O B:ASN145 4.4 71.2 1.0 HB2 B:GLN150 4.4 60.3 1.0 CB B:ASP140 4.5 59.9 1.0 H122 B:XQY301 4.5 79.6 1.0 O16 B:XQY301 4.5 79.4 1.0 N B:ASP140 4.6 61.6 1.0 HE21 B:GLN150 4.6 81.4 1.0 HA B:PHE146 4.6 93.4 1.0 C B:GLN139 4.6 57.7 1.0 OE2 B:GLU138 4.7 51.2 1.0 CA B:GLU138 4.7 53.4 1.0 HB3 B:GLU147 4.7 91.4 1.0 O B:GLN139 4.7 56.4 1.0 H B:ASP140 4.7 74.2 1.0 CG B:GLN150 4.7 54.3 1.0 HA B:ASP140 4.7 70.5 1.0 HB2 B:ASP140 4.8 72.2 1.0 CA B:CA303 4.8 53.1 1.0 C12 B:XQY301 4.8 66.1 1.0 CA B:GLU147 4.8 81.4 1.0 N B:GLN139 4.9 49.4 1.0 CA B:ASP140 4.9 58.4 1.0 CB B:GLN150 5.0 50.0 1.0

Calcium binding site 4 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca303 b:53.1 occ:1.00 O B:GLN139 2.3 56.4 1.0 O14 B:XQY301 2.4 66.4 1.0 OD1 B:ASN61 2.6 62.2 1.0 HA B:ASP140 2.7 70.5 1.0 OE2 B:GLU138 3.0 51.2 1.0 HB2 B:ASP60 3.0 70.8 1.0 OE1 B:GLU138 3.1 60.0 1.0 OD1 B:ASP140 3.2 63.3 1.0 C B:GLN139 3.4 57.7 1.0 HD21 B:ASN61 3.4 77.9 1.0 CG B:ASP60 3.4 60.4 1.0 OD2 B:ASP60 3.4 55.5 1.0 CG B:ASN61 3.5 63.6 1.0 CD B:GLU138 3.5 55.2 1.0 CA B:ASP140 3.6 58.4 1.0 CB B:ASP60 3.7 58.7 1.0 P13 B:XQY301 3.7 75.2 1.0 O B:ASP60 3.7 54.2 1.0 ND2 B:ASN61 3.7 64.6 1.0 H121 B:XQY301 3.8 79.6 1.0 OD1 B:ASP60 3.8 61.8 1.0 N B:ASP140 3.9 61.6 1.0 H122 B:XQY301 3.9 79.6 1.0 C12 B:XQY301 4.0 66.1 1.0 C B:ASP60 4.1 60.3 1.0 CG B:ASP140 4.2 65.5 1.0 HB3 B:ASP60 4.4 70.8 1.0 CB B:ASP140 4.5 59.9 1.0 CA B:ASP60 4.5 60.6 1.0 O15 B:XQY301 4.5 67.1 1.0 HD22 B:ASN61 4.5 77.9 1.0 O16 B:XQY301 4.6 79.4 1.0 C B:ASP140 4.6 53.7 1.0 CA B:GLN139 4.6 52.2 1.0 N B:ASN61 4.7 60.6 1.0 H B:ASP140 4.7 74.2 1.0 H B:GLN139 4.7 59.7 1.0 CB B:ASN61 4.7 61.7 1.0 CA B:CA302 4.8 52.5 1.0 HA B:ASN61 4.8 73.4 1.0 HB3 B:ASP140 4.8 72.2 1.0 N B:GLN139 4.8 49.4 1.0 O B:ASP140 4.8 52.2 1.0 CG B:GLU138 5.0 52.3 1.0

Calcium binding site 5 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca302 b:59.7 occ:1.00 HG3 C:GLU147 2.4 72.8 1.0 OE1 C:GLN150 2.5 58.7 1.0 O16 C:XQY301 2.8 71.1 1.0 OE1 C:GLU138 2.9 60.6 1.0 HB3 C:GLU138 2.9 73.5 1.0 OD2 C:ASP140 3.0 58.4 1.0 OD1 C:ASP140 3.1 50.5 1.0 HB2 C:GLU147 3.2 77.8 1.0 CG C:GLU147 3.2 60.4 1.0 OE2 C:GLU147 3.2 60.5 1.0 CG C:ASP140 3.3 53.7 1.0 O14 C:XQY301 3.5 67.4 1.0 CD C:GLN150 3.5 61.7 1.0 HE22 C:GLN150 3.5 76.2 1.0 H C:GLU147 3.5 86.7 1.0 CD C:GLU147 3.6 59.0 1.0 CB C:GLU147 3.7 64.5 1.0 P13 C:XQY301 3.7 83.2 1.0 CB C:GLU138 3.8 60.9 1.0 NE2 C:GLN150 3.9 63.2 1.0 O C:GLU138 3.9 63.7 1.0 CD C:GLU138 4.0 56.1 1.0 HG2 C:GLU147 4.0 72.8 1.0 N C:GLU147 4.1 71.9 1.0 CG C:GLU138 4.3 56.6 1.0 HB2 C:GLU138 4.3 73.5 1.0 O C:ASN145 4.3 73.9 1.0 HG3 C:GLU138 4.3 68.3 1.0 C C:GLU138 4.4 62.1 1.0 HB2 C:GLN150 4.4 68.7 1.0 HA C:PHE146 4.5 97.5 1.0 HB3 C:GLU147 4.5 77.8 1.0 CA C:GLU147 4.5 71.4 1.0 CB C:ASP140 4.6 61.2 1.0 H122 C:XQY301 4.6 76.5 1.0 CA C:GLU138 4.7 58.0 1.0 HE21 C:GLN150 4.7 76.2 1.0 O15 C:XQY301 4.7 84.5 1.0 CG C:GLN150 4.8 59.8 1.0 HB2 C:ASP140 4.8 73.8 1.0 N C:ASP140 4.8 61.3 1.0 OE1 C:GLU147 4.8 60.2 1.0 CA C:CA303 4.9 42.9 1.0 C C:GLN139 4.9 56.6 1.0 C12 C:XQY301 4.9 63.4 1.0 C C:PHE146 4.9 77.2 1.0 H C:ASP140 4.9 74.0 1.0 CB C:GLN150 5.0 57.0 1.0

Calcium binding site 6 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca303 b:42.9 occ:1.00 OD1 C:ASN61 2.5 43.8 1.0 O14 C:XQY301 2.6 67.4 1.0 OE1 C:GLU138 2.7 60.6 1.0 O C:GLN139 2.7 52.3 1.0 OE2 C:GLU138 2.7 49.0 1.0 HD21 C:ASN61 2.9 64.5 1.0 CD C:GLU138 3.1 56.1 1.0 OD1 C:ASP140 3.2 50.5 1.0 CG C:ASN61 3.2 48.7 1.0 H121 C:XQY301 3.3 76.5 1.0 HA C:ASP140 3.3 75.4 1.0 ND2 C:ASN61 3.3 53.4 1.0 H122 C:XQY301 3.4 76.5 1.0 C12 C:XQY301 3.6 63.4 1.0 HB2 C:ASP60 3.6 61.6 1.0 P13 C:XQY301 3.6 83.2 1.0 OD2 C:ASP60 3.7 45.2 1.0 CG C:ASP60 3.7 48.0 1.0 C C:GLN139 3.8 56.6 1.0 OD1 C:ASP60 4.0 47.0 1.0 O C:ASP60 4.0 49.7 1.0 CB C:ASP60 4.1 51.0 1.0 HD22 C:ASN61 4.1 64.5 1.0 CA C:ASP140 4.2 62.5 1.0 CG C:ASP140 4.4 53.7 1.0 C C:ASP60 4.4 50.4 1.0 N C:ASP140 4.4 61.3 1.0 O16 C:XQY301 4.5 71.1 1.0 CG C:GLU138 4.6 56.6 1.0 HD22 C:LEU64 4.6 46.5 1.0 CB C:ASN61 4.6 47.3 1.0 O15 C:XQY301 4.6 84.5 1.0 HG3 C:GLU138 4.8 68.3 1.0 HA C:ASN61 4.8 54.9 1.0 H072 C:XQY301 4.8 97.4 1.0 N C:ASN61 4.8 51.7 1.0 H C:GLN139 4.9 75.9 1.0 CA C:CA302 4.9 59.7 1.0 CB C:ASP140 4.9 61.2 1.0 HB3 C:ASP60 4.9 61.6 1.0 HB2 C:ASN61 4.9 57.1 1.0 CA C:ASP60 4.9 51.3 1.0 N C:GLN139 4.9 63.0 1.0 HG2 C:GLU138 5.0 68.3 1.0 CA C:GLN139 5.0 59.2 1.0

Calcium binding site 7 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca302 b:47.0 occ:1.00 OD1 D:ASP140 2.4 61.8 1.0 O16 D:XQY301 2.4 63.5 1.0 OE1 D:GLU138 2.6 55.7 1.0 OD2 D:ASP140 2.7 66.7 1.0 HG3 D:GLU147 2.7 71.1 1.0 OE1 D:GLN150 2.7 56.9 1.0 CG D:ASP140 2.8 61.9 1.0 OE2 D:GLU147 3.0 57.4 1.0 O14 D:XQY301 3.0 73.0 1.0 HB3 D:GLU138 3.3 54.9 1.0 P13 D:XQY301 3.3 71.1 1.0 CG D:GLU147 3.5 59.0 1.0 HE22 D:GLN150 3.5 72.3 1.0 HB2 D:GLU147 3.6 76.5 1.0 CD D:GLU147 3.6 63.0 1.0 CD D:GLN150 3.7 56.6 1.0 CD D:GLU138 3.7 56.0 1.0 NE2 D:GLN150 4.0 60.0 1.0 H D:GLU147 4.1 72.0 1.0 CB D:GLU147 4.1 63.5 1.0 CB D:GLU138 4.2 45.5 1.0 O D:GLU138 4.2 47.1 1.0 CB D:ASP140 4.2 59.2 1.0 HG2 D:GLU147 4.2 71.1 1.0 H122 D:XQY301 4.3 72.3 1.0 O15 D:XQY301 4.3 61.3 1.0 CG D:GLU138 4.4 49.8 1.0 HG3 D:GLU138 4.4 60.1 1.0 CA D:CA303 4.4 48.7 1.0 O D:ASN145 4.5 57.4 1.0 C12 D:XQY301 4.5 60.0 1.0 HA D:ASP140 4.5 70.1 1.0 C D:GLU138 4.6 44.0 1.0 N D:ASP140 4.6 57.9 1.0 HB2 D:ASP140 4.6 71.4 1.0 N D:GLU147 4.6 59.7 1.0 O D:GLN139 4.7 50.0 1.0 C D:GLN139 4.7 50.6 1.0 HB2 D:GLN150 4.7 62.0 1.0 HB2 D:GLU138 4.7 54.9 1.0 CA D:ASP140 4.7 58.1 1.0 OE2 D:GLU138 4.7 55.6 1.0 H D:ASP140 4.8 69.9 1.0 HE21 D:GLN150 4.8 72.3 1.0 OE1 D:GLU147 4.8 72.7 1.0 HB3 D:ASP140 4.8 71.4 1.0 HB3 D:GLU147 4.8 76.5 1.0 HA D:PHE146 4.9 64.1 1.0

Calcium binding site 8 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca303 b:48.7 occ:1.00 OD1 D:ASN61 2.4 55.2 1.0 O D:GLN139 2.5 50.0 1.0 O14 D:XQY301 2.5 73.0 1.0 OE2 D:GLU138 2.6 55.6 1.0 OE1 D:GLU138 2.8 55.7 1.0 HD21 D:ASN61 2.8 63.7 1.0 CD D:GLU138 3.0 56.0 1.0 CG D:ASN61 3.2 51.9 1.0 HA D:ASP140 3.2 70.1 1.0 ND2 D:ASN61 3.3 52.8 1.0 OD1 D:ASP140 3.3 61.8 1.0 H121 D:XQY301 3.4 72.3 1.0 H122 D:XQY301 3.4 72.3 1.0 HB2 D:ASP60 3.5 60.6 1.0 P13 D:XQY301 3.6 71.1 1.0 C D:GLN139 3.6 50.6 1.0 C12 D:XQY301 3.6 60.0 1.0 CG D:ASP60 3.7 56.0 1.0 OD2 D:ASP60 3.8 50.3 1.0 O D:ASP60 4.0 43.5 1.0 CA D:ASP140 4.0 58.1 1.0 OD1 D:ASP60 4.0 60.3 1.0 HD22 D:ASN61 4.1 63.7 1.0 CB D:ASP60 4.1 50.2 1.0 N D:ASP140 4.2 57.9 1.0 C D:ASP60 4.3 47.3 1.0 CG D:ASP140 4.4 61.9 1.0 CA D:CA302 4.4 47.0 1.0 O16 D:XQY301 4.5 63.5 1.0 CG D:GLU138 4.5 49.8 1.0 CB D:ASN61 4.5 49.9 1.0 HD22 D:LEU64 4.6 55.1 1.0 O15 D:XQY301 4.6 61.3 1.0 H D:GLN139 4.7 54.9 1.0 HA D:ASN61 4.7 55.5 1.0 N D:GLN139 4.7 45.4 1.0 CA D:GLN139 4.8 48.6 1.0 N D:ASN61 4.8 50.1 1.0 CB D:ASP140 4.8 59.2 1.0 HG3 D:GLU138 4.8 60.1 1.0 HG2 D:GLU138 4.9 60.1 1.0 HB2 D:ASN61 4.9 60.3 1.0 HB3 D:ASP60 4.9 60.6 1.0 H072 D:XQY301 4.9 95.2 1.0 CA D:ASP60 4.9 49.0 1.0 CA D:ASN61 5.0 45.9 1.0 H D:ASP140 5.0 69.9 1.0

Calcium binding site 9 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Ca302 b:57.1 occ:1.00 HG3 E:GLU147 2.3 87.5 1.0 OD2 E:ASP140 2.5 79.4 1.0 OE1 E:GLN150 2.6 59.6 1.0 OD1 E:ASP140 2.7 73.3 1.0 OE1 E:GLU138 2.7 74.2 1.0 O14 E:XQY301 2.8 76.6 1.0 CG E:ASP140 2.9 77.6 1.0 HB3 E:GLU138 3.1 82.4 1.0 OE2 E:GLU147 3.2 70.6 1.0 CG E:GLU147 3.2 72.7 1.0 HB2 E:GLU147 3.4 74.7 1.0 O16 E:XQY301 3.5 82.9 1.0 HE22 E:GLN150 3.6 74.3 1.0 H E:GLU147 3.6 74.5 1.0 CD E:GLN150 3.6 57.5 1.0 CD E:GLU147 3.6 71.7 1.0 P13 E:XQY301 3.8 91.7 1.0 CB E:GLU147 3.8 62.0 1.0 CD E:GLU138 3.9 71.9 1.0 HG2 E:GLU147 3.9 87.5 1.0 O E:GLU138 3.9 68.9 1.0 NE2 E:GLN150 4.0 61.6 1.0 CB E:GLU138 4.1 68.3 1.0 O E:ASN145 4.1 86.7 1.0 N E:GLU147 4.1 61.8 1.0 CB E:ASP140 4.3 79.6 1.0 CG E:GLU138 4.4 71.8 1.0 HA E:PHE146 4.4 75.2 1.0 C E:GLU138 4.4 65.6 1.0 HG3 E:GLU138 4.5 86.5 1.0 HB2 E:ASP140 4.5 95.9 1.0 HB2 E:GLN150 4.6 74.2 1.0 N E:ASP140 4.6 74.5 1.0 HB3 E:GLU147 4.6 74.7 1.0 HB2 E:GLU138 4.6 82.4 1.0 CA E:GLU147 4.6 63.4 1.0 H122 E:XQY301 4.6 83.4 1.0 H E:ASP140 4.7 89.7 1.0 C E:GLN139 4.7 67.3 1.0 HA E:ASP140 4.8 85.6 1.0 O15 E:XQY301 4.8 78.1 1.0 CA E:CA303 4.8 67.9 1.0 CA E:ASP140 4.8 71.1 1.0 HE21 E:GLN150 4.8 74.3 1.0 OE1 E:GLU147 4.9 67.3 1.0 O E:GLN139 4.9 68.6 1.0 CA E:GLU138 4.9 59.6 1.0 C E:PHE146 4.9 61.1 1.0 HB3 E:ASP140 4.9 95.9 1.0 C12 E:XQY301 4.9 69.2 1.0 CG E:GLN150 4.9 55.2 1.0 OE2 E:GLU138 4.9 65.1 1.0

Calcium binding site 10 out of 40 in the Pentraxin - Ligand Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of Pentraxin - Ligand Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Ca303 b:67.9 occ:1.00 OD1 E:ASN61 2.3 71.8 1.0 OE2 E:GLU138 2.4 65.1 1.0 O E:GLN139 2.5 68.6 1.0 OE1 E:GLU138 2.7 74.2 1.0 O16 E:XQY301 2.8 82.9 1.0 CD E:GLU138 2.9 71.9 1.0 HD21 E:ASN61 3.0 93.5 1.0 CG E:ASN61 3.2 76.2 1.0 HA E:ASP140 3.2 85.6 1.0 OD1 E:ASP140 3.3 73.3 1.0 ND2 E:ASN61 3.4 77.6 1.0 H122 E:XQY301 3.4 83.4 1.0 H121 E:XQY301 3.4 83.4 1.0 HB2 E:ASP60 3.5 70.6 1.0 C E:GLN139 3.6 67.3 1.0 C12 E:XQY301 3.7 69.2 1.0 P13 E:XQY301 3.8 91.7 1.0 CG E:ASP60 3.8 55.2 1.0 OD2 E:ASP60 3.8 50.4 1.0 O E:ASP60 3.8 58.7 1.0 CA E:ASP140 4.1 71.1 1.0 OD1 E:ASP60 4.1 60.7 1.0 CB E:ASP60 4.2 58.5 1.0 N E:ASP140 4.2 74.5 1.0 HD22 E:ASN61 4.2 93.5 1.0 C E:ASP60 4.3 60.9 1.0 CG E:ASP140 4.4 77.6 1.0 CG E:GLU138 4.4 71.8 1.0 HD22 E:LEU64 4.5 50.2 1.0 CB E:ASN61 4.5 72.7 1.0 H E:GLN139 4.6 77.0 1.0 HA E:ASN61 4.6 85.2 1.0 O14 E:XQY301 4.6 76.6 1.0 N E:GLN139 4.7 63.8 1.0 CA E:GLN139 4.7 59.3 1.0 HG3 E:GLU138 4.7 86.5 1.0 N E:ASN61 4.7 75.8 1.0 HG2 E:GLU138 4.8 86.5 1.0 CA E:CA302 4.8 57.1 1.0 CB E:ASP140 4.8 79.6 1.0 O15 E:XQY301 4.8 78.1 1.0 CA E:ASP60 4.9 60.8 1.0 CA E:ASN61 4.9 70.7 1.0 H072 E:XQY301 4.9 91.5 1.0 HB3 E:ASP60 4.9 70.6 1.0 HD13 E:LEU64 4.9 63.5 1.0 HB2 E:ASN61 5.0 87.6 1.0 H E:ASP140 5.0 89.7 1.0

K.S.C.T.Shing, C.J.Morton, M.W.Parker. Pentraxin - Ligand Complex To Be Published.