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Calcium in PDB 7wli: Cryoem Structure of Human Low-Voltage Activated T-Type Calcium Channel CAV3.3 (Apo)

Calcium Binding Sites:

The binding sites of Calcium atom in the Cryoem Structure of Human Low-Voltage Activated T-Type Calcium Channel CAV3.3 (Apo) (pdb code 7wli). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Cryoem Structure of Human Low-Voltage Activated T-Type Calcium Channel CAV3.3 (Apo), PDB code: 7wli:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 7wli

Go back to Calcium Binding Sites List in 7wli
Calcium binding site 1 out of 2 in the Cryoem Structure of Human Low-Voltage Activated T-Type Calcium Channel CAV3.3 (Apo)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryoem Structure of Human Low-Voltage Activated T-Type Calcium Channel CAV3.3 (Apo) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2301

b:30.3
occ:1.00
OE2 A:GLU357 2.4 24.9 1.0
CD A:GLU357 3.1 24.9 1.0
OE1 A:GLU357 3.2 24.9 1.0
N A:ASN1679 3.9 30.9 1.0
OE2 A:GLU821 3.9 25.2 1.0
OD2 A:ASP1380 4.1 24.4 1.0
OD1 A:ASP1380 4.2 24.4 1.0
OD1 A:ASP1678 4.2 35.5 1.0
CG A:GLU821 4.3 25.2 1.0
CG A:ASP1380 4.3 24.4 1.0
CD A:GLU821 4.4 25.2 1.0
CA A:ASN1679 4.5 30.9 1.0
CG A:GLU357 4.6 24.9 1.0
N A:ASP822 4.6 30.1 1.0
O A:GLY1677 4.7 51.4 1.0
CA A:ASP1678 4.8 35.5 1.0
N A:GLY1381 4.8 25.9 1.0
C A:ASP1678 4.8 35.5 1.0
CA A:GLU821 4.8 25.2 1.0
CB A:ASN1679 5.0 30.9 1.0
OD1 A:ASP822 5.0 30.1 1.0

Calcium binding site 2 out of 2 in 7wli

Go back to Calcium Binding Sites List in 7wli
Calcium binding site 2 out of 2 in the Cryoem Structure of Human Low-Voltage Activated T-Type Calcium Channel CAV3.3 (Apo)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Cryoem Structure of Human Low-Voltage Activated T-Type Calcium Channel CAV3.3 (Apo) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2302

b:45.8
occ:1.00
O A:GLN820 3.3 23.6 1.0
O A:GLY1677 3.4 51.4 1.0
OE1 A:GLU357 3.7 24.9 1.0
O A:LEU356 4.1 25.2 1.0
OE1 A:GLN820 4.2 23.6 1.0
O A:THR355 4.3 16.3 1.0
CB A:GLN820 4.3 23.6 1.0
C A:GLY1677 4.4 51.4 1.0
O A:LYS1379 4.4 20.8 1.0
C A:GLN820 4.5 23.6 1.0
O A:THR1676 4.7 49.0 1.0
O A:THR819 4.8 19.9 1.0
C A:LEU356 4.8 25.2 1.0
CA A:GLY1677 5.0 51.4 1.0
OD2 A:ASP1380 5.0 24.4 1.0
CD A:GLU357 5.0 24.9 1.0

Reference:

L.He, Z.Yu, Z.Geng, Z.Huang, C.Zhang, Y.Dong, Y.Gao, Y.Wang, Q.Chen, L.Sun, X.Ma, B.Huang, X.Wang, Y.Zhao. Structure, Gating, and Pharmacology of Human Ca V 3.3 Channel. Nat Commun V. 13 2084 2022.
ISSN: ESSN 2041-1723
PubMed: 35440630
DOI: 10.1038/S41467-022-29728-0
Page generated: Fri Jul 19 05:43:05 2024

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