Calcium in PDB 7xqx: Crystal Structure of T2R-Ttl-27A Complex
Protein crystallography data
The structure of Crystal Structure of T2R-Ttl-27A Complex, PDB code: 7xqx
was solved by
T.Lun,
C.Y.Wu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
72.19 /
3.36
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
105.386,
157.49,
180.668,
90,
90,
90
|
R / Rfree (%)
|
19.7 /
24.5
|
Other elements in 7xqx:
The structure of Crystal Structure of T2R-Ttl-27A Complex also contains other interesting chemical elements:
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of T2R-Ttl-27A Complex
(pdb code 7xqx). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Crystal Structure of T2R-Ttl-27A Complex, PDB code: 7xqx:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 7xqx
Go back to
Calcium Binding Sites List in 7xqx
Calcium binding site 1 out
of 2 in the Crystal Structure of T2R-Ttl-27A Complex
 Mono view
 Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of T2R-Ttl-27A Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca503
b:100.1
occ:1.00
|
OE2
|
A:GLU55
|
2.3
|
88.5
|
1.0
|
OD1
|
A:ASP39
|
2.3
|
70.6
|
1.0
|
OD2
|
A:ASP39
|
2.3
|
73.6
|
1.0
|
OG1
|
A:THR41
|
2.4
|
92.1
|
1.0
|
O
|
A:THR41
|
2.4
|
87.6
|
1.0
|
O
|
A:GLY44
|
2.6
|
76.2
|
1.0
|
CG
|
A:ASP39
|
2.6
|
71.2
|
1.0
|
OE1
|
A:GLU55
|
2.6
|
77.2
|
1.0
|
CD
|
A:GLU55
|
2.8
|
83.4
|
1.0
|
C
|
A:THR41
|
3.5
|
86.2
|
1.0
|
C
|
A:GLY44
|
3.7
|
69.7
|
1.0
|
CB
|
A:THR41
|
3.7
|
83.9
|
1.0
|
CZ
|
A:PHE49
|
4.0
|
81.9
|
1.0
|
CA
|
A:THR41
|
4.1
|
83.8
|
1.0
|
CB
|
A:ASP39
|
4.1
|
67.1
|
1.0
|
CG
|
A:GLU55
|
4.3
|
77.3
|
1.0
|
CE1
|
A:PHE49
|
4.4
|
76.2
|
1.0
|
N
|
A:THR41
|
4.4
|
90.8
|
1.0
|
N
|
A:GLY45
|
4.4
|
71.2
|
1.0
|
CA
|
A:GLY45
|
4.4
|
83.4
|
1.0
|
OD1
|
A:ASP47
|
4.5
|
88.9
|
1.0
|
OD1
|
A:ASN50
|
4.5
|
69.8
|
1.0
|
N
|
A:GLY44
|
4.6
|
90.4
|
1.0
|
NE2
|
A:HIS61
|
4.7
|
85.0
|
1.0
|
N
|
A:ILE42
|
4.7
|
85.5
|
1.0
|
CA
|
A:GLY44
|
4.7
|
78.6
|
1.0
|
ND2
|
A:ASN50
|
4.7
|
93.7
|
1.0
|
CG2
|
A:THR41
|
4.7
|
80.3
|
1.0
|
CG
|
A:ASP47
|
4.8
|
75.8
|
1.0
|
CA
|
A:ASP39
|
4.9
|
78.0
|
1.0
|
OD2
|
A:ASP47
|
4.9
|
73.5
|
1.0
|
|
Calcium binding site 2 out
of 2 in 7xqx
Go back to
Calcium Binding Sites List in 7xqx
Calcium binding site 2 out
of 2 in the Crystal Structure of T2R-Ttl-27A Complex
 Mono view
 Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of T2R-Ttl-27A Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca503
b:47.4
occ:1.00
|
OE2
|
C:GLU55
|
2.3
|
49.0
|
1.0
|
OG1
|
C:THR41
|
2.3
|
53.9
|
1.0
|
OD1
|
C:ASP39
|
2.5
|
55.4
|
1.0
|
OD2
|
C:ASP39
|
2.6
|
57.2
|
1.0
|
O
|
C:GLY44
|
2.7
|
59.6
|
1.0
|
O
|
C:THR41
|
2.7
|
64.5
|
1.0
|
OE1
|
C:GLU55
|
2.9
|
52.8
|
1.0
|
CG
|
C:ASP39
|
2.9
|
51.0
|
1.0
|
CD
|
C:GLU55
|
2.9
|
58.5
|
1.0
|
CB
|
C:THR41
|
3.5
|
55.9
|
1.0
|
C
|
C:GLY44
|
3.6
|
62.9
|
1.0
|
C
|
C:THR41
|
3.7
|
66.0
|
1.0
|
OD2
|
C:ASP47
|
3.8
|
51.3
|
1.0
|
CA
|
C:THR41
|
4.0
|
53.8
|
1.0
|
CA
|
C:GLY45
|
4.1
|
65.2
|
1.0
|
N
|
C:THR41
|
4.1
|
63.2
|
1.0
|
N
|
C:GLY45
|
4.2
|
64.7
|
1.0
|
OD1
|
C:ASN50
|
4.3
|
55.1
|
1.0
|
CB
|
C:ASP39
|
4.4
|
50.5
|
1.0
|
CG
|
C:GLU55
|
4.4
|
45.4
|
1.0
|
CZ
|
C:PHE49
|
4.5
|
50.6
|
1.0
|
CE1
|
C:PHE49
|
4.6
|
57.5
|
1.0
|
NE2
|
C:HIS61
|
4.6
|
48.9
|
1.0
|
CA
|
C:GLY44
|
4.7
|
65.0
|
1.0
|
CG2
|
C:THR41
|
4.7
|
56.5
|
1.0
|
N
|
C:GLY44
|
4.7
|
67.9
|
1.0
|
N
|
C:ILE42
|
4.9
|
72.8
|
1.0
|
ND2
|
C:ASN50
|
5.0
|
57.2
|
1.0
|
CG
|
C:ASP47
|
5.0
|
52.9
|
1.0
|
|
Reference:
T.Lun,
W.Yuxi.
Crystal Structure of T2R-Tt Complex To Be Published.
Page generated: Fri Jul 19 06:00:36 2024
|