Calcium in PDB 7xqy: Crystal Structure of T2R-Ttl-15 Complex
Protein crystallography data
The structure of Crystal Structure of T2R-Ttl-15 Complex, PDB code: 7xqy
was solved by
T.Lun,
W.Chengyong,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
41.58 /
2.35
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
105.42,
158.33,
180.98,
90,
90,
90
|
R / Rfree (%)
|
19.9 /
23.6
|
Other elements in 7xqy:
The structure of Crystal Structure of T2R-Ttl-15 Complex also contains other interesting chemical elements:
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of T2R-Ttl-15 Complex
(pdb code 7xqy). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Crystal Structure of T2R-Ttl-15 Complex, PDB code: 7xqy:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 7xqy
Go back to
Calcium Binding Sites List in 7xqy
Calcium binding site 1 out
of 2 in the Crystal Structure of T2R-Ttl-15 Complex
 Mono view
 Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of T2R-Ttl-15 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca503
b:75.4
occ:1.00
|
O
|
A:THR41
|
2.1
|
88.8
|
1.0
|
OD1
|
A:ASP39
|
2.3
|
77.0
|
1.0
|
OD2
|
A:ASP39
|
2.3
|
75.7
|
1.0
|
O
|
A:GLY44
|
2.4
|
69.3
|
1.0
|
OE1
|
A:GLU55
|
2.4
|
80.5
|
1.0
|
OE2
|
A:GLU55
|
2.5
|
72.1
|
1.0
|
CG
|
A:ASP39
|
2.6
|
74.0
|
1.0
|
CD
|
A:GLU55
|
2.8
|
79.9
|
1.0
|
OG1
|
A:THR41
|
2.9
|
84.0
|
1.0
|
C
|
A:THR41
|
3.2
|
86.7
|
1.0
|
CB
|
A:THR41
|
3.5
|
88.9
|
1.0
|
C
|
A:GLY44
|
3.5
|
75.2
|
1.0
|
CA
|
A:THR41
|
3.8
|
82.6
|
1.0
|
CB
|
A:ASP39
|
4.1
|
71.5
|
1.0
|
N
|
A:THR41
|
4.2
|
84.4
|
1.0
|
N
|
A:GLY44
|
4.3
|
77.7
|
1.0
|
CG
|
A:GLU55
|
4.3
|
78.7
|
1.0
|
CZ
|
A:PHE49
|
4.3
|
69.0
|
1.0
|
N
|
A:ILE42
|
4.4
|
83.2
|
1.0
|
N
|
A:GLY45
|
4.4
|
79.8
|
1.0
|
CA
|
A:GLY44
|
4.4
|
79.9
|
1.0
|
CA
|
A:GLY45
|
4.5
|
77.6
|
1.0
|
NE2
|
A:HIS61
|
4.5
|
75.1
|
1.0
|
CA
|
A:ILE42
|
4.7
|
86.3
|
1.0
|
OD1
|
A:ASN50
|
4.7
|
73.4
|
1.0
|
ND2
|
A:ASN50
|
4.8
|
83.3
|
1.0
|
OD1
|
A:ASP47
|
4.8
|
85.6
|
1.0
|
CE1
|
A:PHE49
|
4.9
|
70.3
|
1.0
|
CA
|
A:ASP39
|
4.9
|
82.1
|
1.0
|
CG2
|
A:THR41
|
4.9
|
87.0
|
1.0
|
C
|
A:ASP39
|
5.0
|
84.1
|
1.0
|
C
|
A:ILE42
|
5.0
|
79.1
|
1.0
|
|
Calcium binding site 2 out
of 2 in 7xqy
Go back to
Calcium Binding Sites List in 7xqy
Calcium binding site 2 out
of 2 in the Crystal Structure of T2R-Ttl-15 Complex
 Mono view
 Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of T2R-Ttl-15 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca503
b:52.7
occ:1.00
|
O
|
C:THR41
|
2.3
|
63.2
|
1.0
|
OD2
|
C:ASP39
|
2.4
|
48.4
|
1.0
|
O
|
C:GLY44
|
2.5
|
50.0
|
1.0
|
OE1
|
C:GLU55
|
2.5
|
51.4
|
1.0
|
OG1
|
C:THR41
|
2.5
|
56.6
|
1.0
|
OE2
|
C:GLU55
|
2.5
|
49.8
|
1.0
|
OD1
|
C:ASP39
|
2.7
|
58.4
|
1.0
|
O
|
C:HOH604
|
2.8
|
46.1
|
1.0
|
CD
|
C:GLU55
|
2.8
|
52.7
|
1.0
|
CG
|
C:ASP39
|
2.9
|
50.1
|
1.0
|
C
|
C:THR41
|
3.4
|
59.4
|
1.0
|
CB
|
C:THR41
|
3.4
|
63.5
|
1.0
|
C
|
C:GLY44
|
3.5
|
57.7
|
1.0
|
CA
|
C:THR41
|
3.8
|
52.6
|
1.0
|
N
|
C:THR41
|
4.1
|
59.2
|
1.0
|
O
|
C:HOH607
|
4.2
|
51.3
|
1.0
|
CA
|
C:GLY45
|
4.2
|
60.5
|
1.0
|
N
|
C:GLY45
|
4.2
|
64.0
|
1.0
|
OD2
|
C:ASP47
|
4.3
|
60.3
|
1.0
|
CB
|
C:ASP39
|
4.4
|
52.8
|
1.0
|
CG
|
C:GLU55
|
4.4
|
47.0
|
1.0
|
N
|
C:GLY44
|
4.4
|
55.9
|
1.0
|
CA
|
C:GLY44
|
4.5
|
60.4
|
1.0
|
N
|
C:ILE42
|
4.5
|
62.9
|
1.0
|
NE2
|
C:HIS61
|
4.6
|
51.4
|
1.0
|
OD1
|
C:ASN50
|
4.6
|
46.5
|
1.0
|
CZ
|
C:PHE49
|
4.7
|
45.2
|
1.0
|
CG2
|
C:THR41
|
4.8
|
46.7
|
1.0
|
CE1
|
C:PHE49
|
4.9
|
52.3
|
1.0
|
ND2
|
C:ASN50
|
4.9
|
44.6
|
1.0
|
CA
|
C:ILE42
|
5.0
|
54.2
|
1.0
|
|
Reference:
T.Lun,
W.Chengyong.
Crystal Structure of T2R-Ttl-15 Complex To Be Published.
Page generated: Fri Jul 19 06:00:41 2024
|