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Calcium in PDB 8bow: X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617

Enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617

All present enzymatic activity of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617:
3.4.17.21;

Protein crystallography data

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617, PDB code: 8bow was solved by L.Motlova, C.Barinka, M.Benesova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.25 / 1.58
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.281, 130, 159.492, 90, 90, 90
R / Rfree (%) 18.1 / 19.8

Other elements in 8bow:

The structure of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Zinc (Zn) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617 (pdb code 8bow). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617, PDB code: 8bow:

Calcium binding site 1 out of 1 in 8bow

Go back to Calcium Binding Sites List in 8bow
Calcium binding site 1 out of 1 in the X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca803

b:15.2
occ:1.00
 OE2 A:GLU436 2.3 15.7 1.0
O A:TYR272 2.3 16.5 1.0
O A:HOH928 2.4 14.8 1.0
O A:THR269 2.4 15.8 1.0
OE1 A:GLU433 2.4 15.2 1.0
OG1 A:THR269 2.5 15.1 1.0
OE2 A:GLU433 2.5 15.2 1.0
CD A:GLU433 2.8 15.0 1.0
C A:THR269 3.3 15.0 1.0
CB A:THR269 3.3 15.4 1.0
CD A:GLU436 3.4 15.3 1.0
C A:TYR272 3.4 15.5 1.0
OE1 A:GLU436 3.9 14.7 1.0
CA A:THR269 3.9 15.3 1.0
N A:TYR272 4.0 15.4 1.0
CA A:PRO273 4.2 16.3 1.0
CB A:ASP266 4.2 15.8 1.0
N A:ALA274 4.2 16.0 1.0
N A:PRO270 4.3 15.5 1.0
N A:PRO273 4.3 16.3 1.0
CG A:GLU433 4.3 14.2 1.0
CA A:TYR272 4.3 15.6 1.0
C A:PRO273 4.4 16.9 1.0
N A:ASP266 4.4 14.4 1.0
CA A:PRO270 4.4 15.0 1.0
N A:GLY271 4.5 15.9 1.0
O A:ASP266 4.5 15.2 1.0
O A:ALA264 4.5 16.3 1.0
N A:THR269 4.6 16.1 1.0
CG2 A:THR269 4.7 15.2 1.0
CG A:GLU436 4.7 14.7 1.0
C A:PRO270 4.7 16.0 1.0
OD2 A:ASP266 4.8 17.9 1.0
CA A:ASP266 4.8 15.7 1.0
CB A:ALA274 4.9 17.1 1.0
CB A:GLU436 4.9 14.6 1.0
CA A:GLU433 5.0 13.5 1.0
C A:GLY271 5.0 16.4 1.0

Reference:

L.Motlova, C.Barinka, M.Benesova. X-Ray Structure of Human Glutamate Carboxypeptidase II (Gcpii) in Complex with An Inhibitor 617 To Be Published.
Page generated: Thu Jul 10 03:30:56 2025

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