Calcium in PDB 8d02: Crystal Structure of Bacillus Anthracis Bxpb

Protein crystallography data

The structure of Crystal Structure of Bacillus Anthracis Bxpb, PDB code: 8d02 was solved by D.Chattopadhyay, C.L.Turnbough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.95 / 1.40
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 99.902, 99.902, 99.902, 90, 90, 90
R / Rfree (%) 17.5 / 18.6

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Bacillus Anthracis Bxpb (pdb code 8d02). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Bacillus Anthracis Bxpb, PDB code: 8d02:

Calcium binding site 1 out of 1 in 8d02

Go back to Calcium Binding Sites List in 8d02
Calcium binding site 1 out of 1 in the Crystal Structure of Bacillus Anthracis Bxpb


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Bacillus Anthracis Bxpb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:15.9
occ:1.00
OD1 A:ASP87 2.4 17.9 1.0
OG1 A:THR153 2.4 17.4 1.0
O A:THR153 2.4 17.2 1.0
O A:SER89 2.5 18.9 1.0
O A:HOH319 2.5 17.6 1.0
OE2 A:GLU94 2.5 16.6 1.0
OE1 A:GLU94 2.5 16.8 1.0
O A:HOH353 2.5 16.8 1.0
CD A:GLU94 2.8 15.7 1.0
CG A:ASP87 3.4 17.1 1.0
C A:THR153 3.5 17.1 1.0
CB A:THR153 3.6 14.2 1.0
C A:SER89 3.6 18.8 1.0
OD2 A:ASP87 3.8 20.2 1.0
CA A:THR153 3.8 14.0 1.0
N A:THR153 4.0 14.8 1.0
N A:SER89 4.0 18.1 1.0
N A:ASP87 4.1 16.4 1.0
CG A:GLU94 4.3 14.8 1.0
N A:ASN88 4.4 16.9 1.0
CA A:SER89 4.4 19.4 1.0
N A:PRO90 4.6 18.4 1.0
CB A:ASP87 4.6 18.1 1.0
CD A:PRO90 4.6 19.7 1.0
N A:VAL154 4.7 14.8 1.0
CA A:ASP87 4.7 17.1 1.0
CG2 A:THR153 4.8 15.8 1.0
C A:ASP87 4.8 17.3 1.0
O A:HOH314 4.9 21.2 1.0
CE1 A:PHE35 4.9 20.6 1.0
CB A:SER89 5.0 20.8 1.0

Reference:

D.Chattopadhyay, D.Walker, S.Rich-New, J.Kearney, C.L.Turnbough. Crystal Structure and Induced Stability of Trimeric Bxpb: Implications For the Assembly of Bxpb-Bcla Complexes in the Exosporium of Bacillus Anthracis. Mbio 2023.
ISSN: ESSN 2150-7511
Page generated: Wed Jul 26 13:07:21 2023

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