Calcium in PDB 8dl6: Cryo-Em Structure of Human Ferroportin/SLC40 Bound to CA2+ in Nanodisc

The binding sites of Calcium atom in the Cryo-Em Structure of Human Ferroportin/SLC40 Bound to CA2+ in Nanodisc (pdb code 8dl6). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Human Ferroportin/SLC40 Bound to CA2+ in Nanodisc, PDB code: 8dl6:

Calcium binding site 1 out of 1 in the Cryo-Em Structure of Human Ferroportin/SLC40 Bound to CA2+ in Nanodisc


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Human Ferroportin/SLC40 Bound to CA2+ in Nanodisc within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca601 b:139.4 occ:1.00 OD1 A:ASN100 2.2 133.5 1.0 OE1 A:GLN99 2.6 138.1 1.0 CG A:ASN100 3.0 133.5 1.0 ND2 A:ASN100 3.2 134.1 1.0 OD1 A:ASN212 3.5 147.2 1.0 OD1 A:ASP39 3.5 156.0 1.0 CD A:GLN99 3.7 137.5 1.0 NE2 A:GLN99 4.2 138.4 1.0 CG A:ASN212 4.4 146.4 1.0 CB A:ASN100 4.4 132.0 1.0 O A:ASN212 4.4 147.2 1.0 OE1 A:GLU219 4.5 138.7 1.0 CB A:ASN212 4.5 146.0 1.0 CG A:ASP39 4.6 155.9 1.0 CA A:ASN212 4.8 146.0 1.0 CA A:ASN100 4.8 131.4 1.0 CG A:GLN99 4.9 136.2 1.0 N A:ASN100 4.9 131.8 1.0 OE2 A:GLU219 4.9 138.0 1.0

J.Shen, A.S.Wilbon, M.Zhou, Y.Pan. Mechanism of Ca 2+ Transport By Ferroportin. Elife V. 12 2023.
ISSN: ESSN 2050-084X
PubMed: 36648329
DOI: 10.7554/ELIFE.82947