Calcium in PDB 8eog: Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine

The structure of Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Calcium atom in the Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine (pdb code 8eog). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine, PDB code: 8eog:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in the Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca1106 b:80.0 occ:1.00 OG D:SER265 2.5 82.2 1.0 OG1 D:THR333 2.5 84.2 1.0 OD2 K:ASP151 3.0 57.1 1.0 OG D:SER263 3.0 80.7 1.0 CB D:SER265 3.3 82.2 1.0 CB D:SER263 3.6 80.7 1.0 CB D:THR333 3.8 84.2 1.0 CG K:ASP151 4.2 57.1 1.0 OD2 D:ASP261 4.3 72.2 1.0 N D:SER265 4.3 82.2 1.0 CG2 D:THR333 4.3 84.2 1.0 CA D:SER265 4.4 82.2 1.0 CB K:ASP151 4.7 57.1 1.0 OD2 D:ASP365 4.9 83.2 1.0 N D:THR333 4.9 84.2 1.0 OD1 D:ASP365 4.9 83.2 1.0 CA D:SER263 4.9 80.7 1.0 CA D:THR333 4.9 84.2 1.0 C D:SER265 5.0 82.2 1.0

Calcium binding site 2 out of 3 in the Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine within 5.0Å range: probe atom residue distance (Å) B Occ K:Ca1706 b:60.9 occ:1.00 OE2 K:GLU1115 2.4 74.5 1.0 OE1 K:GLU363 3.1 69.4 1.0 OE1 K:GLU706 3.1 57.3 1.0 OE2 K:GLU363 3.3 69.4 1.0 CD K:GLU1115 3.4 74.5 1.0 O K:GLY1415 3.5 80.0 1.0 CD K:GLU363 3.6 69.4 1.0 OE1 K:GLU1115 3.8 74.5 1.0 O K:PHE1114 4.2 71.5 1.0 CD K:GLU706 4.3 57.3 1.0 CA K:CA1707 4.4 99.7 1.0 C K:GLY1415 4.7 80.0 1.0 CG K:GLU1115 4.8 74.5 1.0 CA K:GLU706 4.8 57.3 1.0 OE2 K:GLU706 4.9 57.3 1.0 CA K:GLU1416 4.9 81.5 1.0

Calcium binding site 3 out of 3 in the Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Structure of the Human L-Type Voltage-Gated Calcium Channel CAV1.2 Complexed with L-Leucine within 5.0Å range: probe atom residue distance (Å) B Occ K:Ca1707 b:99.7 occ:1.00 OE1 K:GLU363 4.3 69.4 1.0 O28 K:WO91705 4.4 78.6 1.0 CA K:CA1706 4.4 60.9 1.0 O26 K:WO91705 4.7 78.6 1.0 O K:THR704 4.7 50.4 1.0 C23 K:WO91705 4.9 78.6 1.0 OE2 K:GLU1115 4.9 74.5 1.0 O K:GLY705 4.9 50.6 1.0 O K:PHE1114 4.9 71.5 1.0

Z.Chen, A.Mondal, F.A.Ali, S.Jang, S.Niranjan, J.L.Montano, B.W.Zaro, D.L.Minor Jr.. Emc Chaperone-Ca V Structure Reveals An Ion Channel Assembly Intermediate. Nature 2023.
ISSN: ESSN 1476-4687
PubMed: 37196677
DOI: 10.1038/S41586-023-06175-5