Calcium in PDB 8f8l: The Structure of RV2173 From M. Tuberculosis with Dmap Bound

All present enzymatic activity of The Structure of RV2173 From M. Tuberculosis with Dmap Bound:
2.5.1.1; 2.5.1.10;

The structure of The Structure of RV2173 From M. Tuberculosis with Dmap Bound, PDB code: 8f8l was solved by J.M.Johnston, T.M.Allison, J.Titterington, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.58 / 2.20
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	66.841, 83.844, 188.122, 90, 90, 90
R / Rfree (%)	21.1 / 24.4

The binding sites of Calcium atom in the The Structure of RV2173 From M. Tuberculosis with Dmap Bound (pdb code 8f8l). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the The Structure of RV2173 From M. Tuberculosis with Dmap Bound, PDB code: 8f8l:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the The Structure of RV2173 From M. Tuberculosis with Dmap Bound


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Structure of RV2173 From M. Tuberculosis with Dmap Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca403 b:45.7 occ:1.00 O1A A:DMA401 2.2 53.0 1.0 OD1 A:ASP84 2.4 35.6 1.0 O A:HOH621 2.4 46.0 1.0 OD2 A:ASP88 2.4 42.3 1.0 O A:HOH608 2.5 52.6 1.0 OD1 A:ASP88 2.9 40.5 1.0 CG A:ASP88 3.0 30.4 1.0 CG A:ASP84 3.4 31.6 1.0 PA A:DMA401 3.5 48.6 1.0 O A:HOH615 3.5 51.6 1.0 OD2 A:ASP84 3.6 37.0 1.0 CA A:CA404 3.6 55.2 1.0 NZ A:LYS194 3.9 52.6 1.0 O2A A:DMA401 4.0 65.6 1.0 OE1 A:GLN170 4.1 36.6 1.0 O1 A:DMA401 4.1 53.5 1.0 C1 A:DMA401 4.4 47.5 1.0 C2 A:DMA401 4.5 51.6 1.0 CB A:ASP88 4.5 32.0 1.0 NE2 A:GLN170 4.5 30.5 1.0 OD2 A:ASP173 4.7 44.5 1.0 CB A:ASP84 4.7 26.1 1.0 O3A A:DMA401 4.7 61.9 1.0 CD A:GLN170 4.7 35.3 1.0 O A:ASP84 4.8 26.3 1.0 O A:HOH605 5.0 38.9 1.0 O2B A:DMA401 5.0 58.6 1.0

Calcium binding site 2 out of 2 in the The Structure of RV2173 From M. Tuberculosis with Dmap Bound


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of The Structure of RV2173 From M. Tuberculosis with Dmap Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca404 b:55.2 occ:1.00 OD2 A:ASP88 2.1 42.3 1.0 O A:HOH506 2.2 32.1 1.0 OD2 A:ASP84 2.2 37.0 1.0 O2B A:DMA401 2.3 58.6 1.0 O A:HOH605 2.4 38.9 1.0 O1A A:DMA401 2.7 53.0 1.0 CG A:ASP88 3.0 30.4 1.0 CG A:ASP84 3.2 31.6 1.0 CB A:ASP88 3.4 32.0 1.0 PB A:DMA401 3.6 66.5 1.0 OD1 A:ASP84 3.6 35.6 1.0 CA A:CA403 3.6 45.7 1.0 O3A A:DMA401 3.8 61.9 1.0 PA A:DMA401 3.8 48.6 1.0 O A:ASP84 4.0 26.3 1.0 OG A:SER90 4.0 34.3 1.0 OD1 A:ASP88 4.1 40.5 1.0 NH2 A:ARG93 4.1 28.2 1.0 OD1 A:ASP85 4.3 31.1 1.0 O1B A:DMA401 4.4 72.3 1.0 C A:ASP84 4.4 29.1 1.0 CB A:ASP84 4.5 26.1 1.0 O3B A:DMA401 4.6 49.8 1.0 C1 A:DMA401 4.7 47.5 1.0 O A:HOH558 4.7 36.8 1.0 O1 A:DMA401 4.8 53.5 1.0 CA A:ASP88 4.9 30.3 1.0 N A:ASP85 4.9 29.5 1.0 O2A A:DMA401 4.9 65.6 1.0 CA A:ASP85 5.0 24.1 1.0

J.M.Johnston, T.M.Allison, J.Titterington, C.P.H.Beasley. The Structure of RV2173 From M. Tuberculosis in Apo-, Ipp-, and Dmap-Bound Forms. To Be Published.