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Calcium in PDB 8fhs: Human L-Type Voltage-Gated Calcium Channel CAV1.2 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution

Other elements in 8fhs:

The structure of Human L-Type Voltage-Gated Calcium Channel CAV1.2 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution also contains other interesting chemical elements:

Fluorine (F) 1 atom
Iodine (I) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Human L-Type Voltage-Gated Calcium Channel CAV1.2 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution (pdb code 8fhs). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Human L-Type Voltage-Gated Calcium Channel CAV1.2 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution, PDB code: 8fhs:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 8fhs

Go back to Calcium Binding Sites List in 8fhs
Calcium binding site 1 out of 2 in the Human L-Type Voltage-Gated Calcium Channel CAV1.2 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human L-Type Voltage-Gated Calcium Channel CAV1.2 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2301

b:33.4
occ:1.00
OE1 A:GLU706 2.5 32.1 1.0
OE1 A:GLU363 2.7 39.3 1.0
OE2 A:GLU1135 2.9 39.1 1.0
OE2 A:GLU363 3.0 34.9 1.0
OE1 A:GLU1135 3.2 29.2 1.0
CD A:GLU363 3.2 32.7 1.0
CD A:GLU1135 3.4 32.5 1.0
CD A:GLU706 3.6 31.2 1.0
O A:GLU1464 3.9 35.0 1.0
O A:GLY1463 3.9 28.9 1.0
OE2 A:GLU706 4.2 35.8 1.0
OE2 A:GLU1464 4.5 40.8 1.0
CA A:GLU706 4.6 23.3 1.0
CG A:GLU363 4.7 21.5 1.0
N A:ASP707 4.7 23.5 1.0
C A:GLU1464 4.7 28.5 1.0
CA A:GLU1464 4.7 24.2 1.0
O A:GLY705 4.8 25.5 1.0
O A:PHE1134 4.8 26.3 1.0
CG A:GLU706 4.8 14.9 1.0
CB A:GLU706 4.9 13.2 1.0
CG A:GLU1135 4.9 28.7 1.0
CD A:GLU1464 5.0 30.3 1.0

Calcium binding site 2 out of 2 in 8fhs

Go back to Calcium Binding Sites List in 8fhs
Calcium binding site 2 out of 2 in the Human L-Type Voltage-Gated Calcium Channel CAV1.2 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Human L-Type Voltage-Gated Calcium Channel CAV1.2 in the Presence of Amiodarone and Sofosbuvir at 3.3 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ca1201

b:37.1
occ:1.00
OG D:SER263 2.3 21.6 1.0
OG1 D:THR331 2.3 38.5 1.0
OD2 A:ASP151 2.4 25.1 1.0
OG D:SER261 3.1 22.0 1.0
CB D:SER263 3.3 17.8 1.0
CG A:ASP151 3.3 16.7 1.0
OD1 A:ASP151 3.5 28.5 1.0
CB D:THR331 3.6 34.2 1.0
CB D:SER261 4.0 15.0 1.0
N D:SER263 4.2 13.9 1.0
CG2 D:THR331 4.2 27.1 1.0
CA D:SER263 4.4 11.9 1.0
OD2 D:ASP259 4.5 39.3 1.0
CB A:ASP151 4.6 14.0 1.0
O D:GLY364 4.6 35.6 1.0
N D:THR331 4.6 26.7 1.0
CA D:THR331 4.7 28.3 1.0
OD1 D:ASP363 4.7 35.6 1.0

Reference:

S.Gao, X.Yao, J.Chen, G.Huang, X.Fan, L.Xue, Z.Li, T.Wu, Y.Zheng, J.Huang, X.Jin, Y.Wang, Z.Wang, Y.Yu, L.Liu, X.Pan, C.Song, N.Yan. Structural Basis For Human Ca V 1.2 Inhibition By Multiple Drugs and the Neurotoxin Calciseptine. Cell V. 186 5363 2023.
ISSN: ISSN 1097-4172
PubMed: 37972591
DOI: 10.1016/J.CELL.2023.10.007
Page generated: Fri Jul 19 08:54:50 2024

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