Calcium in PDB 8fqb: GLUA2 Flip Q Isoform of Ampa Receptor in Complex with Gain-of-Function Tarp GAMMA2, with 10MM CACL2, 140MM Nmdg, 330UM Ctz, and 100MM L- Glutamate (Open-CA10)

Other elements in 8fqb:

The structure of GLUA2 Flip Q Isoform of Ampa Receptor in Complex with Gain-of-Function Tarp GAMMA2, with 10MM CACL2, 140MM Nmdg, 330UM Ctz, and 100MM L- Glutamate (Open-CA10) also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the GLUA2 Flip Q Isoform of Ampa Receptor in Complex with Gain-of-Function Tarp GAMMA2, with 10MM CACL2, 140MM Nmdg, 330UM Ctz, and 100MM L- Glutamate (Open-CA10) (pdb code 8fqb). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the GLUA2 Flip Q Isoform of Ampa Receptor in Complex with Gain-of-Function Tarp GAMMA2, with 10MM CACL2, 140MM Nmdg, 330UM Ctz, and 100MM L- Glutamate (Open-CA10), PDB code: 8fqb:

Calcium binding site 1 out of 1 in 8fqb

Go back to Calcium Binding Sites List in 8fqb
Calcium binding site 1 out of 1 in the GLUA2 Flip Q Isoform of Ampa Receptor in Complex with Gain-of-Function Tarp GAMMA2, with 10MM CACL2, 140MM Nmdg, 330UM Ctz, and 100MM L- Glutamate (Open-CA10)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of GLUA2 Flip Q Isoform of Ampa Receptor in Complex with Gain-of-Function Tarp GAMMA2, with 10MM CACL2, 140MM Nmdg, 330UM Ctz, and 100MM L- Glutamate (Open-CA10) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca901

b:66.7
occ:1.00
O C:HOH1016 2.4 39.3 1.0
O A:HOH918 2.4 38.4 1.0
O D:HOH923 2.4 32.4 1.0
O B:HOH924 2.4 35.5 1.0
O B:HOH931 2.8 30.6 1.0
O D:HOH907 4.1 36.4 1.0
O B:HOH907 4.2 34.5 1.0
CB C:ALA621 4.8 17.7 1.0
O C:THR617 4.9 12.8 1.0
O D:THR617 5.0 33.1 1.0
O D:ALA618 5.0 35.4 1.0

Reference:

T.Nakagawa, X.Wang, F.J.Miguez-Cabello, D.Bowie. The Open Gate of the Ampa Receptor Forms A CA2+ Binding Site Critical in Regulating Ion Transport Nat.Struct.Mol.Biol. 2024.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-024-01228-3
Page generated: Fri Jul 19 09:03:57 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy