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Calcium in PDB 8g1m: Lectin Domain of Sasg (Staphylococcus Aureus Surface Protein G)

Protein crystallography data

The structure of Lectin Domain of Sasg (Staphylococcus Aureus Surface Protein G), PDB code: 8g1m was solved by J.J.Maciag, A.B.Herr, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.41 / 1.93
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 127.099, 43.5, 39.4, 90, 90.56, 90
R / Rfree (%) 14.8 / 19.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Lectin Domain of Sasg (Staphylococcus Aureus Surface Protein G) (pdb code 8g1m). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Lectin Domain of Sasg (Staphylococcus Aureus Surface Protein G), PDB code: 8g1m:

Calcium binding site 1 out of 1 in 8g1m

Go back to Calcium Binding Sites List in 8g1m
Calcium binding site 1 out of 1 in the Lectin Domain of Sasg (Staphylococcus Aureus Surface Protein G)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Lectin Domain of Sasg (Staphylococcus Aureus Surface Protein G) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:4.9
occ:1.00
OD1 A:ASP275 2.3 4.5 1.0
OD2 A:ASP275 2.3 6.2 1.0
O A:GLY277 2.4 8.9 1.0
O A:HOH717 2.4 8.0 1.0
OD1 A:ASP285 2.5 6.0 1.0
OD2 A:ASP285 2.5 11.1 1.0
O A:HOH698 2.5 9.0 1.0
CG A:ASP275 2.7 4.4 1.0
OE1 A:GLN290 2.8 5.1 1.0
CG A:ASP285 2.8 7.8 1.0
C A:GLY277 3.6 8.4 1.0
CD A:GLN290 3.7 7.9 1.0
NE2 A:GLN290 3.9 4.0 1.0
CB A:ASP275 4.2 4.0 1.0
CB A:ASP285 4.2 5.3 1.0
OH A:TYR298 4.3 7.4 1.0
N A:ILE279 4.4 11.4 1.0
N A:GLY277 4.4 6.6 1.0
CE1 A:TYR298 4.4 4.8 1.0
N A:TYR278 4.5 6.2 1.0
CA A:GLY277 4.5 7.8 1.0
O A:LEU261 4.5 7.7 1.0
CA A:TYR278 4.5 10.5 1.0
O A:HOH726 4.6 14.5 1.0
CG1 A:ILE279 4.6 13.9 1.0
O A:ASP240 4.7 3.5 1.0
NZ A:LYS273 4.7 4.5 1.0
CD1 A:ILE279 4.7 19.1 1.0
CZ A:TYR298 4.7 6.9 1.0
C A:TYR278 4.9 7.0 1.0
CB A:ILE279 4.9 12.2 1.0

Reference:

J.J.Maciag, A.B.Herr. Mechanistic Basis of Staphylococcal Interspecies Competition For Skin Colonization To Be Published.
Page generated: Fri Jul 19 09:06:10 2024

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