Calcium in PDB 8gy7: Cryo-Em Structure of Acth-Bound Melanocortin-2 Receptor in Complex with MRAP1 and Gs Protein

The binding sites of Calcium atom in the Cryo-Em Structure of Acth-Bound Melanocortin-2 Receptor in Complex with MRAP1 and Gs Protein (pdb code 8gy7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Cryo-Em Structure of Acth-Bound Melanocortin-2 Receptor in Complex with MRAP1 and Gs Protein, PDB code: 8gy7:

Calcium binding site 1 out of 1 in the Cryo-Em Structure of Acth-Bound Melanocortin-2 Receptor in Complex with MRAP1 and Gs Protein


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Acth-Bound Melanocortin-2 Receptor in Complex with MRAP1 and Gs Protein within 5.0Å range: probe atom residue distance (Å) B Occ R:Ca501 b:65.0 occ:1.00 OD2 R:ASP107 2.0 69.3 1.0 O M:GLU5 2.3 73.0 1.0 OD1 R:ASP103 2.4 88.7 1.0 OD1 R:ASP107 2.6 79.2 1.0 CG R:ASP107 2.6 77.1 1.0 O M:PHE7 3.1 72.2 1.0 C M:GLU5 3.4 75.5 1.0 CG R:ASP103 3.4 93.6 1.0 N M:GLU5 3.5 74.1 1.0 C M:PHE7 3.7 60.5 1.0 OD2 R:ASP103 3.7 93.8 1.0 OE2 R:GLU80 3.8 87.9 1.0 CA M:GLU5 3.9 71.0 1.0 OH R:TYR76 4.0 80.7 1.0 CB R:ASP107 4.1 74.2 1.0 CD R:GLU80 4.1 82.9 1.0 N M:PHE7 4.2 56.9 1.0 CA M:PHE7 4.2 55.1 1.0 NH2 M:ARG8 4.2 78.6 1.0 CB M:GLU5 4.3 76.5 1.0 OE1 R:GLU80 4.4 78.4 1.0 C M:HIS6 4.4 68.7 1.0 N M:ARG8 4.4 68.4 1.0 N M:HIS6 4.5 67.6 1.0 C M:MET4 4.6 86.1 1.0 O R:ASP103 4.7 87.6 1.0 NE M:ARG8 4.7 72.2 1.0 CA M:MET4 4.8 86.6 1.0 CB R:ASP103 4.8 90.8 1.0 CZ M:ARG8 4.8 74.9 1.0 O M:SER3 4.8 80.2 1.0 O M:HIS6 4.8 79.1 1.0 CA M:ARG8 4.8 73.1 1.0 CA M:HIS6 4.9 66.5 1.0 CG R:GLU80 4.9 77.4 1.0

P.Luo, W.Feng, S.Ma, A.Dai, K.Wu, X.Chen, Q.Yuan, X.Cai, D.Yang, M.W.Wang, H.Eric Xu, Y.Jiang. Structural Basis of Signaling Regulation of the Human Melanocortin-2 Receptor By MRAP1. Cell Res. V. 33 46 2023.
ISSN: ISSN 1001-0602
PubMed: 36588120
DOI: 10.1038/S41422-022-00751-6