Calcium in PDB 8hq1: Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
Protein crystallography data
The structure of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2, PDB code: 8hq1
was solved by
H.L.Liu,
Z.H.Lin,
F.Xu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
37.92 /
4.17
|
|
Space group
|
C 1 2 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
373.503,
232.369,
80.035,
90,
94.97,
90
|
|
R / Rfree (%)
|
26.6 /
31.4
|
Calcium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Calcium atom in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
(pdb code 8hq1). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 12 binding sites of Calcium where determined in the
Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2, PDB code: 8hq1:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Calcium binding site 1 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 1 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca804
b:236.3
occ:1.00
|
OE2
|
A:GLU242
|
2.3
|
258.2
|
1.0
|
|
OD1
|
A:ASP325
|
2.3
|
256.3
|
1.0
|
|
O
|
A:CYS433
|
2.5
|
239.7
|
1.0
|
|
OD1
|
A:ASN436
|
2.5
|
248.5
|
1.0
|
|
OD2
|
A:ASP325
|
2.6
|
217.8
|
1.0
|
|
CG
|
A:ASP325
|
2.8
|
237.5
|
1.0
|
|
CD
|
A:GLU242
|
3.0
|
238.1
|
1.0
|
|
CG
|
A:ASN436
|
3.3
|
253.0
|
1.0
|
|
ND2
|
A:ASN436
|
3.5
|
258.3
|
1.0
|
|
C
|
A:CYS433
|
3.6
|
218.2
|
1.0
|
|
OE1
|
A:GLU242
|
3.7
|
227.1
|
1.0
|
|
CG
|
A:GLU242
|
3.9
|
252.9
|
1.0
|
|
CB
|
A:CYS433
|
4.1
|
206.6
|
1.0
|
|
CB
|
A:GLU242
|
4.1
|
255.4
|
1.0
|
|
CA
|
A:CYS433
|
4.3
|
212.6
|
1.0
|
|
CB
|
A:ASP325
|
4.3
|
249.0
|
1.0
|
|
N
|
A:LEU434
|
4.6
|
219.2
|
1.0
|
|
O
|
A:TYR240
|
4.7
|
229.6
|
1.0
|
|
SG
|
A:CYS433
|
4.8
|
215.5
|
1.0
|
|
CB
|
A:ASN436
|
4.8
|
255.1
|
1.0
|
|
CA
|
A:LEU434
|
4.8
|
258.7
|
1.0
|
|
N
|
A:GLU242
|
4.9
|
253.0
|
1.0
|
|
N
|
A:ASP325
|
4.9
|
212.9
|
1.0
|
|
O
|
A:ASN436
|
4.9
|
205.8
|
1.0
|
|
Calcium binding site 2 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 2 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca805
b:341.5
occ:1.00
|
OE2
|
A:GLU456
|
2.3
|
321.8
|
1.0
|
|
O
|
A:PHE451
|
2.4
|
317.2
|
1.0
|
|
OE1
|
A:GLU453
|
2.5
|
323.7
|
1.0
|
|
OE1
|
A:GLU456
|
2.5
|
345.5
|
1.0
|
|
OD2
|
A:ASP459
|
2.5
|
353.4
|
1.0
|
|
CD
|
A:GLU456
|
2.7
|
329.2
|
1.0
|
|
OD1
|
A:ASN449
|
2.8
|
319.6
|
1.0
|
|
O
|
A:GLU446
|
2.9
|
341.6
|
1.0
|
|
CG
|
A:ASN449
|
3.5
|
332.4
|
1.0
|
|
CD
|
A:GLU453
|
3.6
|
303.6
|
1.0
|
|
C
|
A:PHE451
|
3.6
|
319.2
|
1.0
|
|
ND2
|
A:ASN449
|
3.7
|
325.2
|
1.0
|
|
C
|
A:GLU446
|
3.7
|
329.3
|
1.0
|
|
CG
|
A:ASP459
|
3.7
|
349.7
|
1.0
|
|
CA
|
A:CYS447
|
4.0
|
329.2
|
1.0
|
|
CG
|
A:GLU453
|
4.1
|
290.6
|
1.0
|
|
N
|
A:GLU453
|
4.2
|
300.6
|
1.0
|
|
N
|
A:CYS447
|
4.2
|
322.8
|
1.0
|
|
CG
|
A:GLU456
|
4.2
|
329.1
|
1.0
|
|
N
|
A:GLY448
|
4.3
|
330.5
|
1.0
|
|
N
|
A:PHE451
|
4.4
|
333.6
|
1.0
|
|
CB
|
A:GLU453
|
4.4
|
298.2
|
1.0
|
|
N
|
A:GLU446
|
4.5
|
308.6
|
1.0
|
|
N
|
A:ASN449
|
4.5
|
351.6
|
1.0
|
|
CB
|
A:ASP459
|
4.5
|
336.3
|
1.0
|
|
CA
|
A:ILE452
|
4.5
|
320.6
|
1.0
|
|
N
|
A:ILE452
|
4.5
|
319.6
|
1.0
|
|
CA
|
A:PHE451
|
4.6
|
326.2
|
1.0
|
|
C
|
A:CYS447
|
4.6
|
344.1
|
1.0
|
|
OE2
|
A:GLU453
|
4.6
|
291.6
|
1.0
|
|
OD1
|
A:ASP459
|
4.6
|
359.8
|
1.0
|
|
CA
|
A:GLU446
|
4.8
|
318.8
|
1.0
|
|
C
|
A:ILE452
|
4.8
|
308.7
|
1.0
|
|
CB
|
A:ASN449
|
4.8
|
357.0
|
1.0
|
|
SG
|
A:CYS477
|
4.9
|
381.1
|
1.0
|
|
CB
|
A:PHE451
|
5.0
|
326.7
|
1.0
|
|
CA
|
A:GLU453
|
5.0
|
296.8
|
1.0
|
|
Calcium binding site 3 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 3 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca806
b:239.5
occ:1.00
|
OD1
|
A:ASP511
|
2.2
|
262.9
|
1.0
|
|
OE1
|
A:GLU514
|
2.4
|
265.9
|
1.0
|
|
O
|
A:ILE512
|
2.5
|
264.0
|
1.0
|
|
OD1
|
A:ASN526
|
2.5
|
253.0
|
1.0
|
|
O
|
A:ILE527
|
2.6
|
224.2
|
1.0
|
|
CD
|
A:GLU514
|
2.9
|
272.6
|
1.0
|
|
CG
|
A:ASP511
|
3.0
|
264.3
|
1.0
|
|
OE2
|
A:GLU514
|
3.0
|
264.2
|
1.0
|
|
OD2
|
A:ASP511
|
3.1
|
259.9
|
1.0
|
|
CG
|
A:ASN526
|
3.5
|
251.7
|
1.0
|
|
C
|
A:ILE512
|
3.6
|
260.8
|
1.0
|
|
C
|
A:ILE527
|
3.7
|
211.3
|
1.0
|
|
N
|
A:ILE527
|
3.8
|
256.9
|
1.0
|
|
N
|
A:ILE512
|
3.8
|
246.2
|
1.0
|
|
ND2
|
A:ASN526
|
4.0
|
267.8
|
1.0
|
|
CG
|
A:GLU514
|
4.2
|
281.1
|
1.0
|
|
CA
|
A:ILE512
|
4.3
|
244.5
|
1.0
|
|
CB
|
A:ASP511
|
4.4
|
261.1
|
1.0
|
|
CA
|
A:ILE527
|
4.4
|
238.3
|
1.0
|
|
CA
|
A:ASN526
|
4.5
|
263.8
|
1.0
|
|
C
|
A:ASN526
|
4.5
|
262.5
|
1.0
|
|
CB
|
A:ASN526
|
4.6
|
249.0
|
1.0
|
|
N
|
A:ARG513
|
4.6
|
270.9
|
1.0
|
|
N
|
A:HIS528
|
4.6
|
200.1
|
1.0
|
|
C
|
A:ASP511
|
4.7
|
260.5
|
1.0
|
|
CA
|
A:ASP511
|
4.8
|
262.9
|
1.0
|
|
CA
|
A:HIS528
|
4.8
|
242.8
|
1.0
|
|
CA
|
A:ARG513
|
4.8
|
269.1
|
1.0
|
|
CB
|
A:ILE512
|
4.8
|
246.0
|
1.0
|
|
CD
|
A:ARG504
|
4.9
|
254.1
|
1.0
|
|
C
|
A:ARG513
|
5.0
|
263.2
|
1.0
|
|
Calcium binding site 4 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 4 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca804
b:272.8
occ:1.00
|
OD1
|
B:ASP511
|
2.2
|
311.8
|
1.0
|
|
OE1
|
B:GLU514
|
2.4
|
249.8
|
1.0
|
|
O
|
B:ILE512
|
2.5
|
258.3
|
1.0
|
|
OD1
|
B:ASN526
|
2.6
|
266.3
|
1.0
|
|
OE2
|
B:GLU514
|
2.8
|
235.6
|
1.0
|
|
CD
|
B:GLU514
|
2.9
|
248.6
|
1.0
|
|
CG
|
B:ASP511
|
2.9
|
300.0
|
1.0
|
|
OD2
|
B:ASP511
|
2.9
|
290.2
|
1.0
|
|
O
|
B:ILE527
|
3.0
|
241.0
|
1.0
|
|
CG
|
B:ASN526
|
3.4
|
267.8
|
1.0
|
|
C
|
B:ILE512
|
3.6
|
251.6
|
1.0
|
|
ND2
|
B:ASN526
|
3.8
|
265.9
|
1.0
|
|
N
|
B:ILE512
|
3.9
|
249.9
|
1.0
|
|
C
|
B:ILE527
|
4.1
|
238.8
|
1.0
|
|
N
|
B:ILE527
|
4.1
|
241.3
|
1.0
|
|
CG
|
B:GLU514
|
4.3
|
263.9
|
1.0
|
|
CB
|
B:ASP511
|
4.3
|
282.4
|
1.0
|
|
CA
|
B:ILE512
|
4.3
|
244.6
|
1.0
|
|
N
|
B:ARG513
|
4.5
|
255.0
|
1.0
|
|
CB
|
B:ASN526
|
4.6
|
276.1
|
1.0
|
|
C
|
B:ASP511
|
4.7
|
253.0
|
1.0
|
|
CA
|
B:ASN526
|
4.7
|
255.1
|
1.0
|
|
CA
|
B:ARG513
|
4.7
|
256.2
|
1.0
|
|
CD
|
B:ARG504
|
4.7
|
305.6
|
1.0
|
|
CA
|
B:ASP511
|
4.8
|
275.4
|
1.0
|
|
C
|
B:ASN526
|
4.8
|
257.3
|
1.0
|
|
CA
|
B:ILE527
|
4.8
|
236.6
|
1.0
|
|
C
|
B:ARG513
|
4.9
|
257.0
|
1.0
|
|
CA
|
B:ALA506
|
5.0
|
285.6
|
1.0
|
|
CB
|
B:ILE512
|
5.0
|
249.7
|
1.0
|
|
N
|
B:HIS528
|
5.0
|
239.7
|
1.0
|
|
Calcium binding site 5 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 5 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca805
b:213.5
occ:1.00
|
OE2
|
B:GLU242
|
2.3
|
276.0
|
1.0
|
|
OD1
|
B:ASP325
|
2.4
|
217.4
|
1.0
|
|
O
|
B:CYS433
|
2.4
|
217.8
|
1.0
|
|
OD2
|
B:ASP325
|
2.5
|
208.4
|
1.0
|
|
OD1
|
B:ASN436
|
2.6
|
240.8
|
1.0
|
|
CG
|
B:ASP325
|
2.8
|
220.6
|
1.0
|
|
CD
|
B:GLU242
|
2.9
|
252.8
|
1.0
|
|
CG
|
B:ASN436
|
3.4
|
270.3
|
1.0
|
|
ND2
|
B:ASN436
|
3.5
|
275.5
|
1.0
|
|
OE1
|
B:GLU242
|
3.6
|
216.2
|
1.0
|
|
C
|
B:CYS433
|
3.6
|
216.3
|
1.0
|
|
CG
|
B:GLU242
|
3.7
|
248.6
|
1.0
|
|
CB
|
B:GLU242
|
4.0
|
244.9
|
1.0
|
|
CB
|
B:CYS433
|
4.2
|
240.3
|
1.0
|
|
CB
|
B:ASP325
|
4.3
|
232.5
|
1.0
|
|
CA
|
B:CYS433
|
4.4
|
229.1
|
1.0
|
|
O
|
B:TYR240
|
4.5
|
213.4
|
1.0
|
|
N
|
B:LEU434
|
4.6
|
215.8
|
1.0
|
|
N
|
B:GLU242
|
4.6
|
220.2
|
1.0
|
|
CA
|
B:LEU434
|
4.7
|
239.3
|
1.0
|
|
O
|
B:ASN436
|
4.8
|
236.8
|
1.0
|
|
SG
|
B:CYS433
|
4.8
|
240.1
|
1.0
|
|
CB
|
B:ASN436
|
4.9
|
265.1
|
1.0
|
|
N
|
B:ASP325
|
4.9
|
195.4
|
1.0
|
|
CA
|
B:GLU242
|
5.0
|
238.3
|
1.0
|
|
Calcium binding site 6 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 6 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca806
b:285.6
occ:1.00
|
OE2
|
B:GLU456
|
2.2
|
321.4
|
1.0
|
|
OE1
|
B:GLU453
|
2.4
|
291.2
|
1.0
|
|
O
|
B:PHE451
|
2.4
|
298.2
|
1.0
|
|
OD2
|
B:ASP459
|
2.6
|
324.6
|
1.0
|
|
OE1
|
B:GLU456
|
2.6
|
340.2
|
1.0
|
|
CD
|
B:GLU456
|
2.8
|
333.7
|
1.0
|
|
OD1
|
B:ASN449
|
2.8
|
312.6
|
1.0
|
|
O
|
B:GLU446
|
2.9
|
310.5
|
1.0
|
|
CD
|
B:GLU453
|
3.5
|
285.4
|
1.0
|
|
CG
|
B:ASN449
|
3.5
|
297.6
|
1.0
|
|
C
|
B:PHE451
|
3.6
|
291.4
|
1.0
|
|
ND2
|
B:ASN449
|
3.7
|
288.7
|
1.0
|
|
CG
|
B:ASP459
|
3.8
|
324.5
|
1.0
|
|
C
|
B:GLU446
|
3.8
|
308.8
|
1.0
|
|
CG
|
B:GLU453
|
3.9
|
270.7
|
1.0
|
|
N
|
B:GLU453
|
4.0
|
306.6
|
1.0
|
|
CA
|
B:CYS447
|
4.1
|
309.4
|
1.0
|
|
CB
|
B:GLU453
|
4.2
|
292.9
|
1.0
|
|
CG
|
B:GLU456
|
4.3
|
344.0
|
1.0
|
|
N
|
B:CYS447
|
4.3
|
302.7
|
1.0
|
|
N
|
B:PHE451
|
4.4
|
297.8
|
1.0
|
|
N
|
B:GLU446
|
4.5
|
295.3
|
1.0
|
|
CA
|
B:ILE452
|
4.5
|
304.4
|
1.0
|
|
N
|
B:ILE452
|
4.5
|
305.4
|
1.0
|
|
N
|
B:GLY448
|
4.5
|
307.5
|
1.0
|
|
CA
|
B:PHE451
|
4.5
|
278.1
|
1.0
|
|
OE2
|
B:GLU453
|
4.5
|
297.8
|
1.0
|
|
CB
|
B:ASP459
|
4.5
|
321.1
|
1.0
|
|
N
|
B:ASN449
|
4.6
|
304.9
|
1.0
|
|
C
|
B:ILE452
|
4.7
|
292.6
|
1.0
|
|
OD1
|
B:ASP459
|
4.7
|
330.9
|
1.0
|
|
CA
|
B:GLU453
|
4.8
|
308.1
|
1.0
|
|
C
|
B:CYS447
|
4.8
|
314.7
|
1.0
|
|
CA
|
B:GLU446
|
4.8
|
310.9
|
1.0
|
|
CB
|
B:PHE451
|
4.9
|
281.4
|
1.0
|
|
CB
|
B:ASN449
|
4.9
|
294.1
|
1.0
|
|
Calcium binding site 7 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 7 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca804
b:327.3
occ:1.00
|
OD1
|
C:ASP511
|
2.2
|
319.7
|
1.0
|
|
OE1
|
C:GLU514
|
2.4
|
307.1
|
1.0
|
|
OD1
|
C:ASN526
|
2.4
|
297.4
|
1.0
|
|
O
|
C:ILE527
|
2.5
|
287.1
|
1.0
|
|
O
|
C:ILE512
|
2.5
|
297.8
|
1.0
|
|
OE2
|
C:GLU514
|
2.7
|
320.5
|
1.0
|
|
CD
|
C:GLU514
|
2.9
|
317.2
|
1.0
|
|
CG
|
C:ASP511
|
3.0
|
298.8
|
1.0
|
|
OD2
|
C:ASP511
|
3.2
|
277.9
|
1.0
|
|
CG
|
C:ASN526
|
3.4
|
293.2
|
1.0
|
|
C
|
C:ILE527
|
3.5
|
283.9
|
1.0
|
|
C
|
C:ILE512
|
3.6
|
268.2
|
1.0
|
|
N
|
C:ILE527
|
3.7
|
310.0
|
1.0
|
|
N
|
C:ILE512
|
3.8
|
273.9
|
1.0
|
|
ND2
|
C:ASN526
|
4.0
|
288.8
|
1.0
|
|
CA
|
C:ILE512
|
4.2
|
252.0
|
1.0
|
|
CA
|
C:ILE527
|
4.2
|
298.1
|
1.0
|
|
CB
|
C:ASP511
|
4.4
|
290.3
|
1.0
|
|
C
|
C:ASN526
|
4.4
|
316.5
|
1.0
|
|
CG
|
C:GLU514
|
4.4
|
316.8
|
1.0
|
|
CA
|
C:ASN526
|
4.5
|
317.8
|
1.0
|
|
N
|
C:HIS528
|
4.5
|
279.1
|
1.0
|
|
CB
|
C:ASN526
|
4.5
|
311.2
|
1.0
|
|
C
|
C:ASP511
|
4.6
|
284.7
|
1.0
|
|
N
|
C:ARG513
|
4.6
|
268.7
|
1.0
|
|
CB
|
C:ILE512
|
4.7
|
262.5
|
1.0
|
|
CA
|
C:HIS528
|
4.7
|
279.0
|
1.0
|
|
CA
|
C:ASP511
|
4.7
|
295.5
|
1.0
|
|
CA
|
C:ARG513
|
4.9
|
295.9
|
1.0
|
|
CB
|
C:HIS528
|
5.0
|
305.4
|
1.0
|
|
Calcium binding site 8 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 8 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca805
b:239.1
occ:1.00
|
OE2
|
C:GLU242
|
2.3
|
242.2
|
1.0
|
|
OD1
|
C:ASP325
|
2.4
|
242.9
|
1.0
|
|
O
|
C:CYS433
|
2.4
|
249.3
|
1.0
|
|
OD1
|
C:ASN436
|
2.6
|
253.7
|
1.0
|
|
OD2
|
C:ASP325
|
2.6
|
224.7
|
1.0
|
|
CG
|
C:ASP325
|
2.9
|
234.3
|
1.0
|
|
CD
|
C:GLU242
|
3.0
|
251.9
|
1.0
|
|
CG
|
C:ASN436
|
3.5
|
254.5
|
1.0
|
|
ND2
|
C:ASN436
|
3.5
|
245.1
|
1.0
|
|
C
|
C:CYS433
|
3.6
|
249.3
|
1.0
|
|
OE1
|
C:GLU242
|
3.6
|
254.9
|
1.0
|
|
CG
|
C:GLU242
|
3.8
|
276.2
|
1.0
|
|
CB
|
C:GLU242
|
4.1
|
269.6
|
1.0
|
|
CB
|
C:CYS433
|
4.1
|
256.1
|
1.0
|
|
CA
|
C:CYS433
|
4.3
|
242.8
|
1.0
|
|
CB
|
C:ASP325
|
4.4
|
238.6
|
1.0
|
|
N
|
C:LEU434
|
4.6
|
267.0
|
1.0
|
|
O
|
C:TYR240
|
4.7
|
239.2
|
1.0
|
|
CA
|
C:LEU434
|
4.8
|
270.5
|
1.0
|
|
SG
|
C:CYS433
|
4.8
|
281.0
|
1.0
|
|
N
|
C:GLU242
|
4.8
|
252.0
|
1.0
|
|
O
|
C:ASN436
|
4.9
|
271.9
|
1.0
|
|
CB
|
C:ASN436
|
4.9
|
277.5
|
1.0
|
|
N
|
C:ASP325
|
4.9
|
226.3
|
1.0
|
|
Calcium binding site 9 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 9 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 9 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca806
b:343.0
occ:1.00
|
OD2
|
C:ASP459
|
2.2
|
348.2
|
1.0
|
|
OE1
|
C:GLU456
|
2.5
|
347.4
|
1.0
|
|
OE2
|
C:GLU456
|
2.6
|
330.4
|
1.0
|
|
OD1
|
C:ASN449
|
2.6
|
330.8
|
1.0
|
|
O
|
C:PHE451
|
2.6
|
318.9
|
1.0
|
|
OE1
|
C:GLU453
|
2.7
|
315.6
|
1.0
|
|
O
|
C:GLU446
|
2.7
|
352.1
|
1.0
|
|
CD
|
C:GLU456
|
2.9
|
343.2
|
1.0
|
|
CG
|
C:ASN449
|
3.4
|
320.2
|
1.0
|
|
CG
|
C:ASP459
|
3.4
|
349.8
|
1.0
|
|
C
|
C:GLU446
|
3.6
|
353.7
|
1.0
|
|
CA
|
C:CYS447
|
3.7
|
353.7
|
1.0
|
|
ND2
|
C:ASN449
|
3.7
|
310.4
|
1.0
|
|
CD
|
C:GLU453
|
3.9
|
309.4
|
1.0
|
|
N
|
C:GLY448
|
3.9
|
353.8
|
1.0
|
|
C
|
C:PHE451
|
3.9
|
319.3
|
1.0
|
|
N
|
C:CYS447
|
4.0
|
355.8
|
1.0
|
|
N
|
C:ASN449
|
4.1
|
349.6
|
1.0
|
|
C
|
C:CYS447
|
4.2
|
362.9
|
1.0
|
|
OD1
|
C:ASP459
|
4.3
|
355.4
|
1.0
|
|
CB
|
C:ASP459
|
4.3
|
349.2
|
1.0
|
|
CG
|
C:GLU456
|
4.3
|
357.7
|
1.0
|
|
N
|
C:PHE451
|
4.4
|
321.3
|
1.0
|
|
CG
|
C:GLU453
|
4.5
|
294.1
|
1.0
|
|
N
|
C:GLU446
|
4.5
|
339.9
|
1.0
|
|
CB
|
C:ASN449
|
4.6
|
329.8
|
1.0
|
|
N
|
C:GLU453
|
4.7
|
328.8
|
1.0
|
|
SG
|
C:CYS477
|
4.7
|
362.1
|
1.0
|
|
CA
|
C:PHE451
|
4.7
|
308.3
|
1.0
|
|
CA
|
C:GLU446
|
4.7
|
343.1
|
1.0
|
|
N
|
C:GLY450
|
4.8
|
350.3
|
1.0
|
|
OE2
|
C:GLU453
|
4.8
|
320.8
|
1.0
|
|
CB
|
C:CYS447
|
4.8
|
340.2
|
1.0
|
|
N
|
C:ILE452
|
4.8
|
335.9
|
1.0
|
|
CA
|
C:ASN449
|
4.8
|
342.6
|
1.0
|
|
CB
|
C:GLU453
|
4.9
|
307.5
|
1.0
|
|
CA
|
C:ILE452
|
4.9
|
331.4
|
1.0
|
|
CA
|
C:GLY448
|
4.9
|
338.2
|
1.0
|
|
Calcium binding site 10 out
of 12 in 8hq1
Go back to
Calcium Binding Sites List in 8hq1
Calcium binding site 10 out
of 12 in the Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 10 of Crystal Structure of Human LGI1-ADAM22 Complex in Space Group C2 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Ca604
b:222.7
occ:1.00
|
OD2
|
D:ASP334
|
2.4
|
232.0
|
1.0
|
|
O
|
D:VAL382
|
2.5
|
183.5
|
1.0
|
|
OD1
|
D:ASP381
|
2.5
|
237.6
|
1.0
|
|
NZ
|
D:LYS436
|
3.2
|
275.8
|
1.0
|
|
CG
|
D:ASP381
|
3.3
|
220.7
|
1.0
|
|
CG
|
D:ASP334
|
3.4
|
226.6
|
1.0
|
|
OE1
|
D:GLU383
|
3.4
|
203.6
|
1.0
|
|
OD2
|
D:ASP381
|
3.5
|
234.8
|
1.0
|
|
C
|
D:VAL382
|
3.6
|
179.6
|
1.0
|
|
OD1
|
D:ASP334
|
3.7
|
221.9
|
1.0
|
|
OE2
|
D:GLU336
|
3.8
|
234.4
|
1.0
|
|
N
|
D:VAL382
|
4.0
|
185.0
|
1.0
|
|
CE
|
D:LYS436
|
4.2
|
203.6
|
1.0
|
|
CD
|
D:GLU336
|
4.4
|
229.3
|
1.0
|
|
CA
|
D:VAL382
|
4.4
|
166.4
|
1.0
|
|
N
|
D:GLU383
|
4.5
|
200.4
|
1.0
|
|
CA
|
D:GLU383
|
4.6
|
191.0
|
1.0
|
|
CB
|
D:ASP381
|
4.6
|
201.5
|
1.0
|
|
CD
|
D:GLU383
|
4.6
|
222.2
|
1.0
|
|
CD
|
D:LYS436
|
4.7
|
197.7
|
1.0
|
|
O
|
D:ILE335
|
4.8
|
215.9
|
1.0
|
|
CB
|
D:ASP334
|
4.8
|
229.8
|
1.0
|
|
OE1
|
D:GLU336
|
4.8
|
213.4
|
1.0
|
|
CB
|
D:GLU336
|
4.9
|
214.1
|
1.0
|
|
C
|
D:ASP381
|
4.9
|
194.8
|
1.0
|
|
CB
|
D:GLU383
|
4.9
|
188.3
|
1.0
|
|
CA
|
D:ASP381
|
4.9
|
200.8
|
1.0
|
|
O
|
D:VAL435
|
5.0
|
199.6
|
1.0
|
|
Reference:
H.L.Liu,
Z.H.Lin,
F.Xu.
Structure of Human LGI1-ADAM22 Complex in Space Group C2 To Be Published.
Page generated: Fri Jul 19 09:29:40 2024
|
