Calcium in PDB 8oer: MUC5B Amino Acids 26-1435

The binding sites of Calcium atom in the MUC5B Amino Acids 26-1435 (pdb code 8oer). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 8 binding sites of Calcium where determined in the MUC5B Amino Acids 26-1435, PDB code: 8oer:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Calcium binding site 1 out of 8 in the MUC5B Amino Acids 26-1435


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of MUC5B Amino Acids 26-1435 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca805 b:96.2 occ:1.00 OE1 A:GLU218 2.2 86.2 1.0 O A:LEU213 2.3 89.2 1.0 OD1 A:ASN211 2.3 66.5 1.0 ND2 A:ASN211 2.8 68.8 1.0 OD1 A:ASP209 2.8 61.6 1.0 CG A:ASN211 2.9 65.5 1.0 OD2 A:ASP209 3.0 67.8 1.0 OD2 A:ASP89 3.2 70.2 1.0 CG A:ASP209 3.3 62.1 1.0 CB A:ASN217 3.3 104.6 1.0 CD A:GLU218 3.4 86.9 1.0 C A:LEU213 3.4 89.1 1.0 N A:LEU213 4.0 80.2 1.0 CA A:ASN217 4.0 107.6 1.0 N A:ASN217 4.0 110.9 1.0 CA A:LEU213 4.0 86.0 1.0 CB A:LEU213 4.0 86.3 1.0 OE2 A:GLU218 4.1 83.6 1.0 C A:ASN217 4.1 104.8 1.0 N A:GLU218 4.2 97.2 1.0 CG A:ASP89 4.2 68.8 1.0 CG A:GLU218 4.3 88.5 1.0 ND2 A:ASN217 4.4 104.2 1.0 CB A:ASN211 4.4 60.6 1.0 CG A:ASN217 4.4 105.1 1.0 N A:PRO214 4.5 94.2 1.0 O A:PRO214 4.5 99.3 1.0 CA A:PRO214 4.7 95.0 1.0 CB A:ASP209 4.8 57.5 1.0 O A:ASN217 4.8 102.1 1.0 C A:PRO214 4.8 100.9 1.0 N A:ASN211 4.8 58.4 1.0 N A:GLY212 4.9 68.2 1.0 OD1 A:ASP89 5.0 65.1 1.0

Calcium binding site 2 out of 8 in the MUC5B Amino Acids 26-1435


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of MUC5B Amino Acids 26-1435 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca806 b:87.9 occ:1.00 OD1 A:ASP571 2.2 64.0 1.0 OD1 A:ASN566 2.2 76.0 1.0 OD2 A:ASP437 2.3 99.2 1.0 OD1 A:ASP437 2.3 105.3 1.0 CG A:ASP437 2.5 102.6 1.0 OD1 A:ASN564 2.5 85.1 1.0 O A:ASN568 2.7 73.4 1.0 CG A:ASP571 3.2 61.2 1.0 CG A:ASN566 3.4 74.1 1.0 OD2 A:ASP571 3.5 63.3 1.0 OD1 A:ASP572 3.6 67.1 1.0 CG A:ASN564 3.7 84.1 1.0 N A:ASN566 3.7 75.6 1.0 CB A:ASP437 3.7 105.7 1.0 C A:ASN568 3.8 71.3 1.0 N A:ASN568 3.9 71.8 1.0 N A:PHE565 4.0 79.8 1.0 N A:ASP572 4.2 56.1 1.0 CA A:ASN568 4.3 70.5 1.0 ND2 A:ASN566 4.3 73.6 1.0 N A:ASN564 4.3 89.7 1.0 CB A:ASN568 4.3 70.1 1.0 CA A:ASP572 4.3 55.8 1.0 ND2 A:ASN564 4.4 83.2 1.0 CA A:ASN566 4.4 72.3 1.0 CB A:ASN566 4.4 74.1 1.0 N A:GLN567 4.4 63.4 1.0 C A:ASP571 4.5 56.5 1.0 C A:ASN566 4.5 70.1 1.0 CB A:ASP571 4.5 59.6 1.0 C A:ASN564 4.6 82.8 1.0 CG A:ASP572 4.6 61.6 1.0 CA A:PHE565 4.6 80.7 1.0 C A:PHE565 4.6 76.2 1.0 CB A:ASP572 4.7 61.3 1.0 CA A:ASN564 4.8 87.9 1.0 CB A:ASN564 4.8 86.4 1.0 O A:ASP571 4.8 58.8 1.0 N A:GLN569 4.9 64.5 1.0 CA A:ASP571 4.9 57.0 1.0 C A:GLN567 5.0 62.5 1.0 CA A:ASP437 5.0 110.4 1.0

Calcium binding site 3 out of 8 in the MUC5B Amino Acids 26-1435


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of MUC5B Amino Acids 26-1435 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca805 b:75.4 occ:1.00 OD1 B:ASP209 2.3 54.2 1.0 OD2 B:ASP209 2.4 62.5 1.0 OE2 B:GLU218 2.4 76.8 1.0 O B:LEU213 2.4 74.3 1.0 OD1 B:ASN211 2.6 57.2 1.0 CG B:ASP209 2.7 55.2 1.0 OD2 B:ASP89 2.9 56.1 1.0 CG B:ASN211 3.3 55.3 1.0 ND2 B:ASN211 3.3 57.4 1.0 CD B:GLU218 3.3 78.5 1.0 C B:LEU213 3.5 75.2 1.0 CB B:ASN217 3.7 85.2 1.0 CG B:GLU218 4.0 83.4 1.0 CG B:ASP89 4.1 54.3 1.0 N B:LEU213 4.1 63.0 1.0 CB B:ASP209 4.2 50.5 1.0 OE1 B:GLU218 4.2 75.3 1.0 N B:GLU218 4.3 87.9 1.0 CA B:LEU213 4.3 69.9 1.0 CA B:ASN217 4.4 90.6 1.0 N B:ASN217 4.4 96.7 1.0 C B:ASN217 4.4 87.8 1.0 N B:PRO214 4.5 90.8 1.0 O B:PRO214 4.5 98.1 1.0 CA B:PRO214 4.5 93.3 1.0 CB B:LEU213 4.5 68.6 1.0 ND2 B:ASN217 4.6 84.4 1.0 CG B:ASN217 4.7 85.0 1.0 N B:ASP209 4.7 54.8 1.0 CB B:ASN211 4.7 51.1 1.0 C B:PRO214 4.7 101.4 1.0 N B:ASN211 4.8 51.4 1.0 OD1 B:ASP89 4.9 52.0 1.0 CB B:ASP89 4.9 56.9 1.0 N B:GLY212 4.9 57.3 1.0 CA B:GLU218 4.9 85.2 1.0 CA B:ASP209 4.9 53.6 1.0

Calcium binding site 4 out of 8 in the MUC5B Amino Acids 26-1435


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of MUC5B Amino Acids 26-1435 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca806 b:94.7 occ:1.00 OD1 B:ASP571 2.2 94.2 1.0 OD1 B:ASP437 2.3 104.7 1.0 OD1 B:ASN566 2.3 82.6 1.0 OD2 B:ASP437 2.4 98.3 1.0 CG B:ASP437 2.4 101.7 1.0 OD1 B:ASP572 2.5 81.9 1.0 O B:ASN568 2.5 89.1 1.0 OD1 B:ASN564 2.5 104.3 1.0 CG B:ASP571 3.2 95.3 1.0 CG B:ASN566 3.5 80.6 1.0 OD2 B:ASP571 3.6 97.0 1.0 C B:ASN568 3.6 86.8 1.0 CB B:ASP437 3.6 104.4 1.0 CG B:ASP572 3.7 78.1 1.0 CG B:ASN564 3.7 104.9 1.0 N B:ASN566 3.9 77.7 1.0 N B:ASN568 3.9 83.5 1.0 N B:PHE565 4.1 80.6 1.0 CA B:ASN568 4.2 83.6 1.0 CB B:ASN568 4.3 85.1 1.0 N B:ASP572 4.3 78.6 1.0 ND2 B:ASN566 4.3 79.8 1.0 ND2 B:ASN564 4.3 107.4 1.0 N B:ASN564 4.3 104.8 1.0 CA B:ASP572 4.4 73.4 1.0 OD2 B:ASP572 4.5 77.5 1.0 CB B:ASN566 4.5 77.0 1.0 N B:GLN567 4.5 68.7 1.0 CA B:ASN566 4.5 74.2 1.0 CB B:ASP572 4.6 72.9 1.0 CB B:ASP571 4.6 95.9 1.0 C B:ASP571 4.6 89.7 1.0 C B:ASN566 4.6 73.3 1.0 C B:ASN564 4.7 95.0 1.0 CA B:PHE565 4.7 78.8 1.0 N B:GLN569 4.7 78.7 1.0 C B:PHE565 4.8 76.5 1.0 CA B:ASN564 4.9 102.7 1.0 CB B:ASN564 4.9 105.4 1.0 CA B:ASP437 4.9 105.6 1.0 CA B:ASP571 5.0 93.5 1.0

Calcium binding site 5 out of 8 in the MUC5B Amino Acids 26-1435


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of MUC5B Amino Acids 26-1435 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca1302 b:58.7 occ:1.00 OD1 C:ASP1030 2.2 62.2 1.0 OD1 C:ASN1035 2.3 61.2 1.0 O C:ASN1032 2.3 65.8 1.0 OD1 C:ASP1036 2.4 65.9 1.0 OD1 C:ASN1028 2.5 59.9 1.0 OD2 C:ASP1030 2.5 54.2 1.0 CG C:ASP1030 2.6 59.4 1.0 OD2 C:ASP907 3.2 78.8 1.0 CG C:ASP1036 3.4 67.9 1.0 CG C:ASN1035 3.4 60.1 1.0 C C:ASN1032 3.4 66.0 1.0 CG C:ASN1028 3.5 57.8 1.0 N C:ASP1036 3.7 68.8 1.0 CA C:ASP1036 3.8 68.9 1.0 C C:ASN1035 3.9 67.0 1.0 ND2 C:ASN1028 4.0 56.0 1.0 CB C:ASP1036 4.0 68.3 1.0 CB C:ASN1032 4.0 59.2 1.0 ND2 C:ASN1035 4.0 60.8 1.0 CB C:ASP1030 4.1 61.1 1.0 CA C:ASN1032 4.1 61.1 1.0 CG C:ASP907 4.2 78.9 1.0 N C:ASN1032 4.3 58.2 1.0 O C:ASN1035 4.3 68.5 1.0 OD2 C:ASP1036 4.3 70.1 1.0 N C:ALA1033 4.5 91.1 1.0 CB C:ASN1035 4.6 60.4 1.0 N C:ASP1030 4.6 66.2 1.0 CG C:ASN1032 4.6 59.5 1.0 CA C:ASN1035 4.6 63.5 1.0 N C:ASN1035 4.6 62.6 1.0 CA C:ALA1033 4.7 96.3 1.0 N C:ASN1028 4.7 54.4 1.0 CB C:ASN1028 4.8 56.3 1.0 CA C:ASP1030 4.8 62.5 1.0 OD1 C:ASP907 4.9 77.0 1.0 OD1 C:ASN1032 4.9 60.5 1.0 CB C:ASP907 4.9 80.0 1.0

Calcium binding site 6 out of 8 in the MUC5B Amino Acids 26-1435


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of MUC5B Amino Acids 26-1435 within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca2001 b:69.9 occ:1.00 OD1 D:ASN1035 2.2 61.8 1.0 OD1 D:ASP1030 2.2 73.2 1.0 OD1 D:ASP1036 2.2 70.9 1.0 O D:ASN1032 2.4 58.0 1.0 OD1 D:ASN1028 2.5 80.4 1.0 OD2 D:ASP1030 2.6 70.0 1.0 CG D:ASP1030 2.6 73.7 1.0 OD2 D:ASP907 3.2 78.2 1.0 CG D:ASN1035 3.3 61.8 1.0 CG D:ASP1036 3.3 69.4 1.0 C D:ASN1032 3.5 55.9 1.0 CG D:ASN1028 3.5 81.0 1.0 N D:ASP1036 3.6 68.4 1.0 CA D:ASP1036 3.7 70.8 1.0 ND2 D:ASN1035 3.8 64.1 1.0 C D:ASN1035 3.9 65.8 1.0 CB D:ASP1036 3.9 69.8 1.0 ND2 D:ASN1028 4.0 80.5 1.0 CB D:ASP1030 4.1 77.6 1.0 CB D:ASN1032 4.2 57.8 1.0 OD2 D:ASP1036 4.2 72.8 1.0 CG D:ASP907 4.2 76.4 1.0 CA D:ASN1032 4.2 57.7 1.0 O D:ASN1035 4.3 67.3 1.0 N D:ASN1032 4.4 59.8 1.0 CB D:ASN1035 4.5 60.8 1.0 N D:ALA1033 4.5 52.3 1.0 CA D:ASN1035 4.5 62.0 1.0 N D:ASP1030 4.6 85.5 1.0 N D:ASN1035 4.6 57.8 1.0 N D:ASN1028 4.6 74.7 1.0 CG D:ASN1032 4.7 57.0 1.0 CA D:ALA1033 4.7 53.2 1.0 CB D:ASN1028 4.8 80.1 1.0 CA D:ASP1030 4.8 79.1 1.0 OD1 D:ASP907 4.9 79.8 1.0 OD1 D:ASN1032 4.9 55.5 1.0

Calcium binding site 7 out of 8 in the MUC5B Amino Acids 26-1435


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of MUC5B Amino Acids 26-1435 within 5.0Å range: probe atom residue distance (Å) B Occ I:Ca1500 b:148.4 occ:1.00 OE2 I:GLU1359 2.3 155.3 1.0 OD2 I:ASP1357 2.3 142.8 1.0 OD1 I:ASN1345 2.4 158.8 1.0 O I:HIS1347 2.5 162.1 1.0 O I:TYR1420 2.8 141.8 1.0 CG I:ASP1357 3.0 143.9 1.0 OD1 I:ASP1357 3.0 145.1 1.0 CD I:GLU1359 3.3 154.3 1.0 C I:HIS1347 3.4 162.4 1.0 N I:HIS1347 3.5 164.9 1.0 CG I:ASN1345 3.6 158.2 1.0 CA I:HIS1347 3.8 163.5 1.0 CG I:GLU1359 3.8 152.4 1.0 CB I:HIS1347 3.9 162.6 1.0 C I:TYR1420 3.9 140.6 1.0 N I:GLY1346 4.2 184.5 1.0 CA I:ASN1345 4.2 159.0 1.0 OE1 I:GLU1359 4.3 155.2 1.0 C I:ASN1345 4.3 161.6 1.0 N I:TYR1420 4.3 139.8 1.0 CB I:ASP1357 4.4 142.8 1.0 ND2 I:ASN1345 4.4 157.5 1.0 N I:ARG1348 4.5 157.6 1.0 CB I:ASN1345 4.5 158.2 1.0 C I:GLY1346 4.6 185.7 1.0 CD I:PRO1349 4.7 150.6 1.0 CA I:TYR1420 4.7 140.4 1.0 CG I:HIS1347 4.8 162.0 1.0 CD2 I:HIS1347 4.9 161.5 1.0 N I:GLU1421 4.9 139.9 1.0 CA I:ARG1348 4.9 156.2 1.0 CA I:GLY1346 5.0 186.8 1.0 O I:ASN1345 5.0 161.1 1.0 C I:ASP1419 5.0 133.9 1.0

Calcium binding site 8 out of 8 in the MUC5B Amino Acids 26-1435


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of MUC5B Amino Acids 26-1435 within 5.0Å range: probe atom residue distance (Å) B Occ J:Ca1500 b:169.1 occ:1.00 OE2 J:GLU1359 2.2 154.5 1.0 O J:HIS1347 2.3 161.9 1.0 OD2 J:ASP1357 2.4 151.3 1.0 OD1 J:ASP1357 2.6 153.7 1.0 O J:TYR1420 2.8 129.7 1.0 CG J:ASP1357 2.8 152.7 1.0 OD1 J:ASN1345 2.9 147.8 1.0 C J:HIS1347 3.2 162.0 1.0 CD J:GLU1359 3.3 153.7 1.0 N J:HIS1347 3.4 162.6 1.0 CA J:HIS1347 3.6 162.5 1.0 CB J:HIS1347 3.7 162.4 1.0 CG J:GLU1359 3.9 151.5 1.0 C J:TYR1420 3.9 127.4 1.0 CG J:ASN1345 4.0 146.3 1.0 N J:TYR1420 4.1 127.6 1.0 OE1 J:GLU1359 4.3 154.2 1.0 N J:GLY1346 4.3 163.0 1.0 N J:ARG1348 4.3 153.6 1.0 CB J:ASP1357 4.3 151.8 1.0 CD J:PRO1349 4.4 150.7 1.0 C J:GLY1346 4.6 163.8 1.0 CA J:TYR1420 4.6 127.2 1.0 ND2 J:ASN1345 4.8 145.7 1.0 CA J:ARG1348 4.8 152.4 1.0 C J:ASN1345 4.8 149.9 1.0 CA J:ASN1345 4.8 146.3 1.0 CG J:HIS1347 4.9 162.2 1.0 N J:GLU1421 5.0 123.4 1.0

L.Khmelnitsky, G.Javitt, N.Reznik, N.Yeshaya, N.Elad, Y.Anikster, N.Shalva, O.Barel, B.Pode-Shakked, L.J.Greenberg, M.J.Segel, D.Fass. Pulmonary Fibrosis Linked to Impaired Mucin 5B Supramolecular Assembly To Be Published.