Calcium in PDB 8oes: MUC5B Amino Acids 26-1435 Three Beads

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>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 24;

Binding sites:

The binding sites of Calcium atom in the MUC5B Amino Acids 26-1435 Three Beads (pdb code 8oes). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 24 binding sites of Calcium where determined in the MUC5B Amino Acids 26-1435 Three Beads, PDB code: 8oes:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2001 b:58.7 occ:1.00 OD1 A:ASP1030 2.2 62.2 1.0 OD1 A:ASN1035 2.3 61.2 1.0 O A:ASN1032 2.3 65.8 1.0 OD1 A:ASP1036 2.4 65.9 1.0 OD1 A:ASN1028 2.5 59.9 1.0 OD2 A:ASP1030 2.5 54.2 1.0 CG A:ASP1030 2.6 59.4 1.0 OD2 A:ASP907 3.2 78.8 1.0 CG A:ASP1036 3.4 67.9 1.0 CG A:ASN1035 3.4 60.1 1.0 C A:ASN1032 3.4 66.0 1.0 CG A:ASN1028 3.5 57.8 1.0 N A:ASP1036 3.7 68.8 1.0 CA A:ASP1036 3.8 68.9 1.0 C A:ASN1035 3.9 67.0 1.0 ND2 A:ASN1028 4.0 56.0 1.0 CB A:ASP1036 4.0 68.3 1.0 CB A:ASN1032 4.0 59.2 1.0 ND2 A:ASN1035 4.0 60.8 1.0 CB A:ASP1030 4.1 61.1 1.0 CA A:ASN1032 4.1 61.1 1.0 CG A:ASP907 4.2 78.9 1.0 N A:ASN1032 4.3 58.2 1.0 O A:ASN1035 4.3 68.5 1.0 OD2 A:ASP1036 4.3 70.1 1.0 N A:ALA1033 4.5 91.1 1.0 CB A:ASN1035 4.6 60.4 1.0 N A:ASP1030 4.6 66.2 1.0 CG A:ASN1032 4.6 59.5 1.0 CA A:ASN1035 4.6 63.5 1.0 N A:ASN1035 4.6 62.6 1.0 CA A:ALA1033 4.7 96.3 1.0 N A:ASN1028 4.7 54.4 1.0 CB A:ASN1028 4.8 56.3 1.0 CA A:ASP1030 4.8 62.5 1.0 OD1 A:ASP907 4.9 77.0 1.0 OD1 A:ASN1032 4.9 60.5 1.0 CB A:ASP907 4.9 80.0 1.0

Calcium binding site 2 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2002 b:96.2 occ:1.00 OE1 A:GLU218 2.2 86.2 1.0 O A:LEU213 2.3 89.2 1.0 OD1 A:ASN211 2.3 66.5 1.0 ND2 A:ASN211 2.8 68.8 1.0 OD1 A:ASP209 2.8 61.6 1.0 CG A:ASN211 2.9 65.5 1.0 OD2 A:ASP209 3.0 67.8 1.0 OD2 A:ASP89 3.2 70.2 1.0 CG A:ASP209 3.3 62.1 1.0 CB A:ASN217 3.3 104.6 1.0 CD A:GLU218 3.4 86.9 1.0 C A:LEU213 3.4 89.1 1.0 N A:LEU213 4.0 80.2 1.0 CA A:ASN217 4.0 107.6 1.0 N A:ASN217 4.0 110.9 1.0 CA A:LEU213 4.0 86.0 1.0 CB A:LEU213 4.0 86.3 1.0 OE2 A:GLU218 4.1 83.6 1.0 C A:ASN217 4.1 104.8 1.0 N A:GLU218 4.2 97.2 1.0 CG A:ASP89 4.2 68.8 1.0 CG A:GLU218 4.3 88.5 1.0 ND2 A:ASN217 4.4 104.2 1.0 CB A:ASN211 4.4 60.6 1.0 CG A:ASN217 4.4 105.1 1.0 N A:PRO214 4.5 94.2 1.0 O A:PRO214 4.5 99.3 1.0 CA A:PRO214 4.7 95.0 1.0 CB A:ASP209 4.8 57.5 1.0 O A:ASN217 4.8 102.1 1.0 C A:PRO214 4.8 100.9 1.0 N A:ASN211 4.8 58.4 1.0 N A:GLY212 4.9 68.2 1.0 OD1 A:ASP89 5.0 65.1 1.0

Calcium binding site 3 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca2003 b:87.9 occ:1.00 OD1 A:ASP571 2.2 64.0 1.0 OD1 A:ASN566 2.2 76.0 1.0 OD2 A:ASP437 2.3 99.2 1.0 OD1 A:ASP437 2.3 105.3 1.0 CG A:ASP437 2.5 102.6 1.0 OD1 A:ASN564 2.5 85.1 1.0 O A:ASN568 2.7 73.4 1.0 CG A:ASP571 3.2 61.2 1.0 CG A:ASN566 3.4 74.1 1.0 OD2 A:ASP571 3.5 63.3 1.0 OD1 A:ASP572 3.6 67.1 1.0 CG A:ASN564 3.7 84.1 1.0 N A:ASN566 3.7 75.6 1.0 CB A:ASP437 3.7 105.7 1.0 C A:ASN568 3.8 71.3 1.0 N A:ASN568 3.9 71.8 1.0 N A:PHE565 4.0 79.8 1.0 N A:ASP572 4.2 56.1 1.0 CA A:ASN568 4.3 70.5 1.0 ND2 A:ASN566 4.3 73.6 1.0 N A:ASN564 4.3 89.7 1.0 CB A:ASN568 4.3 70.1 1.0 CA A:ASP572 4.3 55.8 1.0 ND2 A:ASN564 4.4 83.2 1.0 CA A:ASN566 4.4 72.3 1.0 CB A:ASN566 4.4 74.1 1.0 N A:GLN567 4.4 63.4 1.0 C A:ASP571 4.5 56.5 1.0 C A:ASN566 4.5 70.1 1.0 CB A:ASP571 4.5 59.6 1.0 C A:ASN564 4.6 82.8 1.0 CG A:ASP572 4.6 61.6 1.0 CA A:PHE565 4.6 80.7 1.0 C A:PHE565 4.6 76.2 1.0 CB A:ASP572 4.7 61.3 1.0 CA A:ASN564 4.8 87.9 1.0 CB A:ASN564 4.8 86.4 1.0 O A:ASP571 4.8 58.8 1.0 N A:GLN569 4.9 64.5 1.0 CA A:ASP571 4.9 57.0 1.0 C A:GLN567 5.0 62.5 1.0 CA A:ASP437 5.0 110.4 1.0

Calcium binding site 4 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca2001 b:58.7 occ:1.00 OD1 B:ASP1030 2.2 62.2 1.0 OD1 B:ASN1035 2.3 61.2 1.0 O B:ASN1032 2.3 65.8 1.0 OD1 B:ASP1036 2.4 65.9 1.0 OD1 B:ASN1028 2.5 59.9 1.0 OD2 B:ASP1030 2.5 54.2 1.0 CG B:ASP1030 2.6 59.4 1.0 OD2 B:ASP907 3.2 78.8 1.0 CG B:ASP1036 3.4 67.9 1.0 CG B:ASN1035 3.4 60.1 1.0 C B:ASN1032 3.4 66.0 1.0 CG B:ASN1028 3.5 57.8 1.0 N B:ASP1036 3.7 68.8 1.0 CA B:ASP1036 3.8 68.9 1.0 C B:ASN1035 3.9 67.0 1.0 ND2 B:ASN1028 4.0 56.0 1.0 CB B:ASP1036 4.0 68.3 1.0 CB B:ASN1032 4.0 59.2 1.0 ND2 B:ASN1035 4.0 60.8 1.0 CB B:ASP1030 4.1 61.1 1.0 CA B:ASN1032 4.1 61.1 1.0 CG B:ASP907 4.2 78.9 1.0 N B:ASN1032 4.3 58.2 1.0 O B:ASN1035 4.3 68.5 1.0 OD2 B:ASP1036 4.3 70.1 1.0 N B:ALA1033 4.5 91.1 1.0 CB B:ASN1035 4.6 60.4 1.0 N B:ASP1030 4.6 66.2 1.0 CG B:ASN1032 4.6 59.5 1.0 CA B:ASN1035 4.6 63.5 1.0 N B:ASN1035 4.6 62.6 1.0 CA B:ALA1033 4.7 96.3 1.0 N B:ASN1028 4.7 54.4 1.0 CB B:ASN1028 4.8 56.3 1.0 CA B:ASP1030 4.8 62.5 1.0 OD1 B:ASP907 4.9 77.0 1.0 OD1 B:ASN1032 4.9 60.5 1.0 CB B:ASP907 4.9 80.0 1.0

Calcium binding site 5 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca2002 b:75.4 occ:1.00 OD1 B:ASP209 2.3 54.2 1.0 OD2 B:ASP209 2.4 62.5 1.0 OE2 B:GLU218 2.4 76.8 1.0 O B:LEU213 2.4 74.3 1.0 OD1 B:ASN211 2.6 57.2 1.0 CG B:ASP209 2.7 55.2 1.0 OD2 B:ASP89 2.9 56.1 1.0 CG B:ASN211 3.3 55.3 1.0 ND2 B:ASN211 3.3 57.4 1.0 CD B:GLU218 3.3 78.5 1.0 C B:LEU213 3.5 75.2 1.0 CB B:ASN217 3.7 85.2 1.0 CG B:GLU218 4.0 83.4 1.0 CG B:ASP89 4.1 54.3 1.0 N B:LEU213 4.1 63.0 1.0 CB B:ASP209 4.2 50.5 1.0 OE1 B:GLU218 4.2 75.3 1.0 N B:GLU218 4.3 87.9 1.0 CA B:LEU213 4.3 69.9 1.0 CA B:ASN217 4.4 90.6 1.0 N B:ASN217 4.4 96.7 1.0 C B:ASN217 4.4 87.8 1.0 N B:PRO214 4.5 90.8 1.0 O B:PRO214 4.5 98.1 1.0 CA B:PRO214 4.5 93.3 1.0 CB B:LEU213 4.5 68.6 1.0 ND2 B:ASN217 4.6 84.4 1.0 CG B:ASN217 4.7 85.0 1.0 N B:ASP209 4.7 54.8 1.0 CB B:ASN211 4.7 51.1 1.0 C B:PRO214 4.7 101.4 1.0 N B:ASN211 4.8 51.4 1.0 OD1 B:ASP89 4.9 52.0 1.0 CB B:ASP89 4.9 56.9 1.0 N B:GLY212 4.9 57.3 1.0 CA B:GLU218 4.9 85.2 1.0 CA B:ASP209 4.9 53.6 1.0

Calcium binding site 6 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca2003 b:94.7 occ:1.00 OD1 B:ASP571 2.2 94.2 1.0 OD1 B:ASP437 2.3 104.7 1.0 OD1 B:ASN566 2.3 82.6 1.0 OD2 B:ASP437 2.4 98.3 1.0 CG B:ASP437 2.4 101.7 1.0 OD1 B:ASP572 2.5 81.9 1.0 O B:ASN568 2.5 89.1 1.0 OD1 B:ASN564 2.5 104.3 1.0 CG B:ASP571 3.2 95.3 1.0 CG B:ASN566 3.5 80.6 1.0 OD2 B:ASP571 3.6 97.0 1.0 C B:ASN568 3.6 86.8 1.0 CB B:ASP437 3.6 104.4 1.0 CG B:ASP572 3.7 78.1 1.0 CG B:ASN564 3.7 104.9 1.0 N B:ASN566 3.9 77.7 1.0 N B:ASN568 3.9 83.5 1.0 N B:PHE565 4.1 80.6 1.0 CA B:ASN568 4.2 83.6 1.0 CB B:ASN568 4.3 85.1 1.0 N B:ASP572 4.3 78.6 1.0 ND2 B:ASN566 4.3 79.8 1.0 ND2 B:ASN564 4.3 107.4 1.0 N B:ASN564 4.3 104.8 1.0 CA B:ASP572 4.4 73.4 1.0 OD2 B:ASP572 4.5 77.5 1.0 CB B:ASN566 4.5 77.0 1.0 N B:GLN567 4.5 68.7 1.0 CA B:ASN566 4.5 74.2 1.0 CB B:ASP572 4.6 72.9 1.0 CB B:ASP571 4.6 95.9 1.0 C B:ASP571 4.6 89.7 1.0 C B:ASN566 4.6 73.3 1.0 C B:ASN564 4.7 95.0 1.0 CA B:PHE565 4.7 78.8 1.0 N B:GLN569 4.7 78.7 1.0 C B:PHE565 4.8 76.5 1.0 CA B:ASN564 4.9 102.7 1.0 CB B:ASN564 4.9 105.4 1.0 CA B:ASP437 4.9 105.6 1.0 CA B:ASP571 5.0 93.5 1.0

Calcium binding site 7 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca2001 b:58.7 occ:1.00 OD1 C:ASP1030 2.2 62.2 1.0 OD1 C:ASN1035 2.3 61.2 1.0 O C:ASN1032 2.3 65.8 1.0 OD1 C:ASP1036 2.4 65.9 1.0 OD1 C:ASN1028 2.5 59.9 1.0 OD2 C:ASP1030 2.5 54.2 1.0 CG C:ASP1030 2.6 59.4 1.0 OD2 C:ASP907 3.2 78.8 1.0 CG C:ASP1036 3.4 67.9 1.0 CG C:ASN1035 3.4 60.1 1.0 C C:ASN1032 3.4 66.0 1.0 CG C:ASN1028 3.5 57.8 1.0 N C:ASP1036 3.7 68.8 1.0 CA C:ASP1036 3.8 68.9 1.0 C C:ASN1035 3.9 67.0 1.0 ND2 C:ASN1028 4.0 56.0 1.0 CB C:ASP1036 4.0 68.3 1.0 CB C:ASN1032 4.0 59.2 1.0 ND2 C:ASN1035 4.0 60.8 1.0 CB C:ASP1030 4.1 61.1 1.0 CA C:ASN1032 4.1 61.1 1.0 CG C:ASP907 4.2 78.9 1.0 N C:ASN1032 4.3 58.2 1.0 O C:ASN1035 4.3 68.5 1.0 OD2 C:ASP1036 4.3 70.1 1.0 N C:ALA1033 4.5 91.1 1.0 CB C:ASN1035 4.6 60.4 1.0 N C:ASP1030 4.6 66.2 1.0 CG C:ASN1032 4.6 59.5 1.0 CA C:ASN1035 4.6 63.5 1.0 N C:ASN1035 4.6 62.6 1.0 CA C:ALA1033 4.7 96.3 1.0 N C:ASN1028 4.7 54.4 1.0 CB C:ASN1028 4.8 56.3 1.0 CA C:ASP1030 4.8 62.5 1.0 OD1 C:ASP907 4.9 77.0 1.0 OD1 C:ASN1032 4.9 60.5 1.0 CB C:ASP907 4.9 80.0 1.0

Calcium binding site 8 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca2002 b:96.2 occ:1.00 OE1 C:GLU218 2.2 86.2 1.0 O C:LEU213 2.3 89.2 1.0 OD1 C:ASN211 2.3 66.5 1.0 ND2 C:ASN211 2.8 68.8 1.0 OD1 C:ASP209 2.8 61.6 1.0 CG C:ASN211 2.9 65.5 1.0 OD2 C:ASP209 3.0 67.8 1.0 OD2 C:ASP89 3.2 70.2 1.0 CG C:ASP209 3.3 62.1 1.0 CB C:ASN217 3.3 104.6 1.0 CD C:GLU218 3.4 86.9 1.0 C C:LEU213 3.4 89.1 1.0 N C:LEU213 4.0 80.2 1.0 CA C:ASN217 4.0 107.6 1.0 N C:ASN217 4.0 110.9 1.0 CA C:LEU213 4.0 86.0 1.0 CB C:LEU213 4.0 86.3 1.0 OE2 C:GLU218 4.1 83.6 1.0 C C:ASN217 4.1 104.8 1.0 N C:GLU218 4.2 97.2 1.0 CG C:ASP89 4.2 68.8 1.0 CG C:GLU218 4.3 88.5 1.0 ND2 C:ASN217 4.4 104.2 1.0 CB C:ASN211 4.4 60.6 1.0 CG C:ASN217 4.4 105.1 1.0 N C:PRO214 4.5 94.2 1.0 O C:PRO214 4.5 99.3 1.0 CA C:PRO214 4.7 95.0 1.0 CB C:ASP209 4.8 57.5 1.0 O C:ASN217 4.8 102.1 1.0 C C:PRO214 4.8 100.9 1.0 N C:ASN211 4.8 58.4 1.0 N C:GLY212 4.9 68.2 1.0 OD1 C:ASP89 5.0 65.1 1.0

Calcium binding site 9 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca2003 b:87.9 occ:1.00 OD1 C:ASP571 2.2 64.0 1.0 OD1 C:ASN566 2.2 76.0 1.0 OD2 C:ASP437 2.3 99.2 1.0 OD1 C:ASP437 2.3 105.3 1.0 CG C:ASP437 2.5 102.6 1.0 OD1 C:ASN564 2.5 85.1 1.0 O C:ASN568 2.7 73.4 1.0 CG C:ASP571 3.2 61.2 1.0 CG C:ASN566 3.4 74.1 1.0 OD2 C:ASP571 3.5 63.3 1.0 OD1 C:ASP572 3.6 67.1 1.0 CG C:ASN564 3.7 84.1 1.0 N C:ASN566 3.7 75.6 1.0 CB C:ASP437 3.7 105.7 1.0 C C:ASN568 3.8 71.3 1.0 N C:ASN568 3.9 71.8 1.0 N C:PHE565 4.0 79.8 1.0 N C:ASP572 4.2 56.1 1.0 CA C:ASN568 4.3 70.5 1.0 ND2 C:ASN566 4.3 73.6 1.0 N C:ASN564 4.3 89.7 1.0 CB C:ASN568 4.3 70.1 1.0 CA C:ASP572 4.3 55.8 1.0 ND2 C:ASN564 4.4 83.2 1.0 CA C:ASN566 4.4 72.3 1.0 CB C:ASN566 4.4 74.1 1.0 N C:GLN567 4.4 63.4 1.0 C C:ASP571 4.5 56.5 1.0 C C:ASN566 4.5 70.1 1.0 CB C:ASP571 4.5 59.6 1.0 C C:ASN564 4.6 82.8 1.0 CG C:ASP572 4.6 61.6 1.0 CA C:PHE565 4.6 80.7 1.0 C C:PHE565 4.6 76.2 1.0 CB C:ASP572 4.7 61.3 1.0 CA C:ASN564 4.8 87.9 1.0 CB C:ASN564 4.8 86.4 1.0 O C:ASP571 4.8 58.8 1.0 N C:GLN569 4.9 64.5 1.0 CA C:ASP571 4.9 57.0 1.0 C C:GLN567 5.0 62.5 1.0 CA C:ASP437 5.0 110.4 1.0

Calcium binding site 10 out of 24 in the MUC5B Amino Acids 26-1435 Three Beads


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of MUC5B Amino Acids 26-1435 Three Beads within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca2001 b:69.9 occ:1.00 OD1 D:ASN1035 2.2 61.8 1.0 OD1 D:ASP1030 2.2 73.2 1.0 OD1 D:ASP1036 2.2 70.9 1.0 O D:ASN1032 2.4 58.0 1.0 OD1 D:ASN1028 2.5 80.4 1.0 OD2 D:ASP1030 2.6 70.0 1.0 CG D:ASP1030 2.6 73.7 1.0 OD2 D:ASP907 3.2 78.2 1.0 CG D:ASN1035 3.3 61.8 1.0 CG D:ASP1036 3.3 69.4 1.0 C D:ASN1032 3.5 55.9 1.0 CG D:ASN1028 3.5 81.0 1.0 N D:ASP1036 3.6 68.4 1.0 CA D:ASP1036 3.7 70.8 1.0 ND2 D:ASN1035 3.8 64.1 1.0 C D:ASN1035 3.9 65.8 1.0 CB D:ASP1036 3.9 69.8 1.0 ND2 D:ASN1028 4.0 80.5 1.0 CB D:ASP1030 4.1 77.6 1.0 CB D:ASN1032 4.2 57.8 1.0 OD2 D:ASP1036 4.2 72.8 1.0 CG D:ASP907 4.2 76.4 1.0 CA D:ASN1032 4.2 57.7 1.0 O D:ASN1035 4.3 67.3 1.0 N D:ASN1032 4.4 59.8 1.0 CB D:ASN1035 4.5 60.8 1.0 N D:ALA1033 4.5 52.3 1.0 CA D:ASN1035 4.5 62.0 1.0 N D:ASP1030 4.6 85.5 1.0 N D:ASN1035 4.6 57.8 1.0 N D:ASN1028 4.6 74.7 1.0 CG D:ASN1032 4.7 57.0 1.0 CA D:ALA1033 4.7 53.2 1.0 CB D:ASN1028 4.8 80.1 1.0 CA D:ASP1030 4.8 79.1 1.0 OD1 D:ASP907 4.9 79.8 1.0 OD1 D:ASN1032 4.9 55.5 1.0

L.Khmelnitsky, G.Javitt, N.Reznik, N.Yeshaya, N.Elad, Y.Anikster, N.Shalva, O.Barel, B.Pode-Shakked, L.J.Greenberg, M.J.Segel, D.Fass. Pulmonary Fibrosis Linked to Impaired Mucin 5B Supramolecular Assembly To Be Published.