Calcium in PDB 8tfo: Structure of Mkvar

The structure of Structure of Mkvar, PDB code: 8tfo was solved by T.S.Peat, J.Newman, L.Esquirol, T.Nebl, C.Scott, C.Vickers, F.Sainsbury, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.09 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	45.081, 80.705, 207.467, 90, 90, 90
R / Rfree (%)	20.8 / 24.7

The binding sites of Calcium atom in the Structure of Mkvar (pdb code 8tfo). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Mkvar, PDB code: 8tfo:

Calcium binding site 1 out of 1 in the Structure of Mkvar


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Mkvar within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca503 b:48.8 occ:1.00 OD1 B:ASN323 2.5 30.8 1.0 CG B:ASN323 3.7 27.6 1.0 O B:HOH640 4.5 38.8 1.0 CA B:ASN323 4.6 26.9 1.0 ND2 B:ASN323 4.6 26.8 1.0 CB B:ASN323 4.6 26.1 1.0 OG B:SER326 5.0 30.5 1.0 O B:HOH636 5.0 31.6 1.0

L.Esquirol, J.Newman, T.Nebl, C.Scott, C.Vickers, F.Sainsbury, T.S.Peat. Characterization of Novel Mevalonate Kinases From the Tardigrade Ramazzottius Varieornatus and the Psychrophilic Archaeon Methanococcoides Burtonii. Acta Crystallogr D Struct V. 80 203 2024BIOL.
ISSN: ISSN 2059-7983
PubMed: 38411551
DOI: 10.1107/S2059798324001360