Calcium in PDB 8tlt: REV1(Deltan)-Polzeta-Dna-Dctp Complex

All present enzymatic activity of REV1(Deltan)-Polzeta-Dna-Dctp Complex:
2.7.7.7;

The structure of REV1(Deltan)-Polzeta-Dna-Dctp Complex also contains other interesting chemical elements:

Iron

(Fe)

4 atoms

The binding sites of Calcium atom in the REV1(Deltan)-Polzeta-Dna-Dctp Complex (pdb code 8tlt). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the REV1(Deltan)-Polzeta-Dna-Dctp Complex, PDB code: 8tlt:

Calcium binding site 1 out of 1 in the REV1(Deltan)-Polzeta-Dna-Dctp Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of REV1(Deltan)-Polzeta-Dna-Dctp Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1602 b:40.0 occ:1.00 OD2 A:ASP1144 2.2 38.2 1.0 O2G A:DCP1603 2.3 45.9 1.0 O A:PHE976 2.3 35.1 1.0 O1B A:DCP1603 2.3 45.9 1.0 O1A A:DCP1603 2.9 45.9 1.0 PB A:DCP1603 3.3 45.9 1.0 O3A A:DCP1603 3.4 45.9 1.0 CG A:ASP1144 3.4 38.2 1.0 PG A:DCP1603 3.5 45.9 1.0 O3B A:DCP1603 3.5 45.9 1.0 C A:PHE976 3.5 35.1 1.0 PA A:DCP1603 3.7 45.9 1.0 O1G A:DCP1603 4.1 45.9 1.0 OD1 A:ASP1144 4.1 38.2 1.0 CB A:ASP975 4.2 38.1 1.0 O A:HOH1769 4.2 34.9 1.0 CA A:GLN977 4.3 34.8 1.0 N A:SER978 4.3 35.5 1.0 N A:GLN977 4.4 34.8 1.0 N A:PHE976 4.4 35.1 1.0 O A:HOH1884 4.4 46.4 1.0 CB A:ASP1144 4.5 38.2 1.0 CA A:PHE976 4.5 35.1 1.0 C5' A:DCP1603 4.5 45.9 1.0 O5' A:DCP1603 4.6 45.9 1.0 C A:ASP975 4.6 38.1 1.0 O2B A:DCP1603 4.6 45.9 1.0 O3G A:DCP1603 4.6 45.9 1.0 C A:GLN977 4.7 34.8 1.0 O2A A:DCP1603 4.9 45.9 1.0 N A:LEU979 5.0 33.1 1.0 CA A:ASP975 5.0 38.1 1.0

R.Malik, R.E.Johnson, I.B.Ubarretxena, L.Prakash, S.Prakash, A.K.Aggarwal. Cryo-Em Structure of the REV1-Polzeta Holocomplex Reveals the Mechanism of Their Cooperativity in Translesion Dna Synthesis Nat.Struct.Mol.Biol. 2024.
ISSN: ESSN 1545-9985