Calcium in PDB 8ua8: Structure of Semliki Forest Virus Vlp in Complex with Vldlr LA2

All present enzymatic activity of Structure of Semliki Forest Virus Vlp in Complex with Vldlr LA2:
3.4.21.90;

The binding sites of Calcium atom in the Structure of Semliki Forest Virus Vlp in Complex with Vldlr LA2 (pdb code 8ua8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Semliki Forest Virus Vlp in Complex with Vldlr LA2, PDB code: 8ua8:

Calcium binding site 1 out of 1 in the Structure of Semliki Forest Virus Vlp in Complex with Vldlr LA2


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Semliki Forest Virus Vlp in Complex with Vldlr LA2 within 5.0Å range: probe atom residue distance (Å) B Occ R:Ca201 b:250.6 occ:1.00 OE2 R:GLU103 2.3 274.6 1.0 OD2 R:ASP96 2.3 271.1 1.0 OD2 R:ASP102 2.7 279.9 1.0 O R:ASP94 2.8 258.5 1.0 O R:TRP89 2.8 261.6 1.0 OD2 R:ASP92 2.8 259.8 1.0 OD1 R:ASP92 2.8 259.8 1.0 CG R:ASP96 3.0 271.1 1.0 CB R:ASP96 3.1 271.1 1.0 CG R:ASP92 3.2 259.8 1.0 CD R:GLU103 3.3 274.6 1.0 N R:ASP96 3.6 271.1 1.0 CG R:ASP102 3.8 279.9 1.0 CG R:GLU103 3.9 274.6 1.0 C R:TRP89 3.9 261.6 1.0 CA R:ASP96 4.0 271.1 1.0 CB R:TRP89 4.0 261.6 1.0 C R:ASP94 4.0 258.5 1.0 OD1 R:ASP96 4.1 271.1 1.0 OE1 R:GLU103 4.2 274.6 1.0 OD1 R:ASP102 4.5 279.9 1.0 CA R:TRP89 4.6 261.6 1.0 CB R:ASP92 4.6 259.8 1.0 C R:PRO95 4.7 263.0 1.0 CA R:ASP94 4.7 258.5 1.0 N R:ASP94 4.7 258.5 1.0 CB R:ASP94 4.8 258.5 1.0 N R:CYS97 4.8 268.2 1.0 CB R:ASP102 4.9 279.9 1.0 CG2 R:VAL85 4.9 275.9 1.0 C R:ASP96 4.9 271.1 1.0 CG R:TRP89 4.9 261.6 1.0 NZ I:LYS345 4.9 87.5 1.0 N R:PRO95 4.9 263.0 1.0 CA R:PRO95 5.0 263.0 1.0

J.Abraham, P.Yang, W.Li, X.Fan, J.Pan. Cryo-Em Structure of Sfv Vlp-VLDLRAD2 Complex at the 3-Fold Axes To Be Published.