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Calcium in PDB 8uo7: Bovine Trypsin in Complex with Deacetylated Wild Type Microviridin J

Enzymatic activity of Bovine Trypsin in Complex with Deacetylated Wild Type Microviridin J

All present enzymatic activity of Bovine Trypsin in Complex with Deacetylated Wild Type Microviridin J:
3.4.21.4;

Protein crystallography data

The structure of Bovine Trypsin in Complex with Deacetylated Wild Type Microviridin J, PDB code: 8uo7 was solved by W.Chen, S.D.Bruner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.55 / 2.20
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.65, 71.65, 72.976, 90, 90, 120
R / Rfree (%) 19.7 / 25.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Bovine Trypsin in Complex with Deacetylated Wild Type Microviridin J (pdb code 8uo7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Bovine Trypsin in Complex with Deacetylated Wild Type Microviridin J, PDB code: 8uo7:

Calcium binding site 1 out of 1 in 8uo7

Go back to Calcium Binding Sites List in 8uo7
Calcium binding site 1 out of 1 in the Bovine Trypsin in Complex with Deacetylated Wild Type Microviridin J


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Bovine Trypsin in Complex with Deacetylated Wild Type Microviridin J within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:52.1
occ:1.00
OE1 A:GLU70 2.2 49.5 1.0
O A:ASN72 2.3 42.3 1.0
O A:VAL75 2.3 64.5 1.0
OE2 A:GLU80 2.4 44.2 1.0
CD A:GLU70 3.3 47.8 1.0
C A:ASN72 3.4 50.6 1.0
CD A:GLU80 3.5 48.7 1.0
OE1 A:GLU77 3.5 66.0 1.0
C A:VAL75 3.5 59.3 1.0
OE2 A:GLU70 3.8 49.4 1.0
CG A:GLU80 3.8 43.4 1.0
O A:HOH448 4.0 40.2 1.0
N A:ASN72 4.2 50.3 1.0
CA A:ASN72 4.3 53.6 1.0
CD A:GLU77 4.3 67.1 1.0
N A:VAL75 4.3 57.5 1.0
N A:GLU77 4.3 68.9 1.0
CG A:GLU77 4.3 65.2 1.0
CA A:ILE73 4.3 51.4 1.0
N A:ILE73 4.3 50.2 1.0
CA A:VAL76 4.4 62.5 1.0
N A:ASP71 4.4 43.2 1.0
N A:VAL76 4.4 61.0 1.0
CA A:VAL75 4.5 57.4 1.0
CG A:GLU70 4.6 48.1 1.0
C A:ILE73 4.6 50.5 1.0
OE1 A:GLU80 4.6 42.2 1.0
CA A:GLU70 4.6 45.4 1.0
CB A:ASN72 4.7 53.6 1.0
CB A:GLU77 4.7 61.8 1.0
C A:VAL76 4.8 65.1 1.0
CB A:GLU70 4.8 48.2 1.0
O A:ILE73 4.9 43.0 1.0
C A:ASP71 5.0 45.7 1.0
N A:ASN74 5.0 49.9 1.0

Reference:

K.P.Patel, W.T.Chen, L.Delbecq, S.D.Bruner. Alternative Linkage Chemistries in the Chemoenzymatic Synthesis of Microviridin-Based Cyclic Peptides. Org.Lett. 2024.
ISSN: ISSN 1523-7060
PubMed: 38306609
DOI: 10.1021/ACS.ORGLETT.3C04045
Page generated: Fri Jul 19 12:14:53 2024

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