Calcium in PDB 8v04: High Resolution TMPRSS2 Structure Following Acylation By Nafamostat

The structure of High Resolution TMPRSS2 Structure Following Acylation By Nafamostat, PDB code: 8v04 was solved by B.J.Fraser, A.Dong, M.Kutera, A.Seitova, Y.Li, A.Hutchinson, A.Edwards, F.Benard, H.Levon, C.Arrowsmith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.81 / 1.58
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	58.757, 50.502, 64.578, 90, 91.6, 90
R / Rfree (%)	15.6 / 18.1

The binding sites of Calcium atom in the High Resolution TMPRSS2 Structure Following Acylation By Nafamostat (pdb code 8v04). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the High Resolution TMPRSS2 Structure Following Acylation By Nafamostat, PDB code: 8v04:

Calcium binding site 1 out of 1 in the High Resolution TMPRSS2 Structure Following Acylation By Nafamostat


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of High Resolution TMPRSS2 Structure Following Acylation By Nafamostat within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca602 b:83.5 occ:1.00 O B:HOH929 2.3 50.5 1.0 OD1 B:ASN303 2.8 16.4 0.5 O B:HOH819 2.9 26.6 1.0 OD1 B:ASN304 3.1 20.4 0.3 O B:HOH918 3.3 49.6 1.0 CG B:ASN303 3.5 15.0 0.5 ND2 B:ASN303 3.5 18.4 0.5 CG B:ASN304 4.1 16.7 0.3 O B:HOH908 4.2 45.3 1.0 O B:PRO301 4.3 25.9 1.0 CA B:PRO301 4.5 22.6 1.0 C B:PRO301 4.6 23.5 1.0 CG B:LYS300 4.7 22.8 1.0 ND2 B:ASN304 4.9 17.0 0.3 CD B:LYS300 4.9 29.4 1.0 CB B:ASN303 5.0 16.1 0.5 CB B:LYS300 5.0 19.2 1.0 CB B:ASN304 5.0 16.1 0.3

B.J.Fraser, A.Dong, M.Kutera, A.Seitova, Y.Li, A.Hutchinson, A.Edwards, F.Benard, H.Levon, C.Arrowsmith. High Resolution TMPRSS2 Structure Following Acylation By Nafamostat To Be Published.