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Calcium in PDB 8vcs: Crystal Structure of the Oligomeric Rmcl-1 in Complex with Lactose

Protein crystallography data

The structure of Crystal Structure of the Oligomeric Rmcl-1 in Complex with Lactose, PDB code: 8vcs was solved by A.Hernandez-Santoyo, J.Loera-Rubalcava, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.39 / 1.89
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.908, 77.871, 155.796, 90, 90.05, 90
R / Rfree (%) 16.7 / 18.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Oligomeric Rmcl-1 in Complex with Lactose (pdb code 8vcs). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Oligomeric Rmcl-1 in Complex with Lactose, PDB code: 8vcs:

Calcium binding site 1 out of 1 in 8vcs

Go back to Calcium Binding Sites List in 8vcs
Calcium binding site 1 out of 1 in the Crystal Structure of the Oligomeric Rmcl-1 in Complex with Lactose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Oligomeric Rmcl-1 in Complex with Lactose within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Ca302

b:64.5
occ:1.00
ND2 G:ASN23 4.2 34.1 1.0
OD1 G:ASN23 4.8 31.2 1.0
CG G:ASN23 5.0 32.5 1.0

Reference:

J.Loera-Rubalcava, E.Garcia-Maldonado, P.Cano-Sanchez, A.Rodriguez-Romero, A.Quintero-Martinez, M.L.Macias-Rubalcava, G.Espinosa-Perez, A.Hernandez-Santoyo. Insights Into A Mytilectin From Mytilus Californianus: Study of Its Unique Galactoside Interactions, Oligomerization Patterns, and Antifungal Activity To Be Published.
Page generated: Thu Jul 10 07:59:36 2025

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